Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  219 bits (557), Expect = 2e-61
 Identities = 155/488 (31%), Positives = 259/488 (53%), Gaps = 36/488 (7%)

Query: 30  LLSVQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLP-AGLRSQG 88
           L+ ++ L+++ + +T+V +LS ++   + L ++GE+GSGKS+ A++I+  LP AG  + G
Sbjct: 3   LIEIRDLSVAFSGQTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTG 62

Query: 89  KIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLV--MGNHA 146
            I   GQ     + A  + L G ++A++ QEP  +LNP+    +Q+ E   L   +G  A
Sbjct: 63  SIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKA 122

Query: 147 ASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLD 203
           A A + +     V + +    L  YPHQLSGG  QRV    A   +  LLIADEPT  LD
Sbjct: 123 AQARILE-LLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALD 181

Query: 204 ASRRDQIIALLQAQLTR--GALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHP 261
            + + +I+ LL++   R   +LL I+HD+ +   +   + VMR G I EQ   Q + + P
Sbjct: 182 VTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAP 241

Query: 262 QSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMH--------RGEKCL--FDSLSFT 311
           Q  Y++ L++A+P         +  E +L VD++ +         R +  L   D +S +
Sbjct: 242 QHPYSRLLLDAEPDADALCSDER--ETVLQVDDLTVQFRLGGGLFRRKTYLRAVDGISLS 299

Query: 312 LSAGEILGISGDSGCGKSTLADLLLGLLKPS-----QGR----IHRLQAIPLGKALKL-Y 361
           +  G+ LGI G+SG GKSTL   +L LL  +     QG     ++  Q  P  K +++ +
Sbjct: 300 VQRGKTLGIVGESGSGKSTLGQAILRLLDSTGSIRFQGEALDPLNNQQMRPWRKQMQVVF 359

Query: 362 QDPPSALAKSVTLQTLLEDVCRQHSV-----ERSQIPRLLERLALSPNLLSRKANQVSGG 416
           QDP  +L+  +T++ ++ +    H+        +Q+ ++L+ + L P    R  ++ SGG
Sbjct: 360 QDPYGSLSPRMTVEQIISEGLEVHAPCSLADRDAQVIQVLKDVGLDPASRHRYPHEFSGG 419

Query: 417 ELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLAL 476
           + QR AI RAL+ +P L++ DEPTS LD       + L+ EL  + G   + ISHD   +
Sbjct: 420 QRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVV 479

Query: 477 EKTCHRVL 484
               H ++
Sbjct: 480 RAMAHDMI 487



 Score =  107 bits (267), Expect = 1e-27
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 25/239 (10%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ +S  +   + L I+GE+GSGKS L  AI+  L     S G I   G+        + 
Sbjct: 293 VDGISLSVQRGKTLGIVGESGSGKSTLGQAILRLLD----STGSIRFQGEALDPLNNQQM 348

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
              W KQ+ V+ Q+P+ +L+P M   + ++E   VH        A  +L D   Q + + 
Sbjct: 349 RP-WRKQMQVVFQDPYGSLSPRMTVEQIISEGLEVH--------APCSLADRDAQVIQVL 399

Query: 163 QDLS-------KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQ 215
           +D+        +YPH+ SGG  QR+A   A   +  L++ DEPT  LD + + Q++ALL+
Sbjct: 400 KDVGLDPASRHRYPHEFSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLR 459

Query: 216 AQLTRGAL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
               +  L  L I+HD+ V   +   +IV++ G + E+G +  V   PQ  YTK L+ A
Sbjct: 460 ELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAA 518