Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417
Score = 224 bits (570), Expect = 8e-63
Identities = 156/490 (31%), Positives = 247/490 (50%), Gaps = 40/490 (8%)
Query: 30 LLSVQQLAISTAQE--TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR-S 86
LL+V+ L I + V+ LSF + + + ++GE+GSGK++ A A IG LP ++
Sbjct: 7 LLNVEHLKIRVGEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVC 66
Query: 87 QGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHA 146
G++ G+ + A+ G + ++ QEP +LNP ++ G+Q++E L +
Sbjct: 67 GGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEA--LKLHTDL 124
Query: 147 ASAALTDSAFQQV------ALHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
+ + + A + L YPHQ SGGM QR+ + LLIADEPT
Sbjct: 125 DPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTT 184
Query: 201 GLDASRRDQIIALLQAQLTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQV 257
LD + +I L+ +LTR A+L I+HD+ + + ++VMR G EQG + +
Sbjct: 185 ALDCLAQLDVIELM-LELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDI 243
Query: 258 LSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKCLF----------DS 307
L P+++YT+ L+ A PR P + EPL+ VD + + F S
Sbjct: 244 LLAPKAEYTRQLLEALPRRGVLAPLPVSNEPLVEVDQVCIEHPGPTTFWGKRQHTRVVHS 303
Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIPLGKALK-------- 359
S ++ GE L + G SG GK+TL L+GL+KP G I R + + + KA
Sbjct: 304 ASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSI-RFKGVDILKAANRTHRLQCQ 362
Query: 360 -LYQDPPSALAKSVTLQTLLEDVCRQH-----SVERSQIPRLLERLALSPNLLSRKANQV 413
++QDP S+L + + +L + R + R ++ + L+ + L + R +Q+
Sbjct: 363 MIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLGEQFVERFPHQL 422
Query: 414 SGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDK 473
SGG+ QR AI RAL+ P L++ADEP S LD L+L L + G A + ISHD
Sbjct: 423 SGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDL 482
Query: 474 LALEKTCHRV 483
A+E+ HRV
Sbjct: 483 AAVERIAHRV 492
Score = 107 bits (267), Expect = 1e-27
Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 19/236 (8%)
Query: 45 LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLP---AGLRSQGKIALFGQYQHQRT 101
+V S S + + L ++G +GSGK+ L +++G + +R +G L + R
Sbjct: 300 VVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAANRTHRL 359
Query: 102 QAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAA-LTDSAFQQVA 160
Q + ++ Q+P+ +LNP M+ GE +AE R G +AA + +
Sbjct: 360 QCQ----------MIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIG 409
Query: 161 L-HQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL---LQA 216
L Q + ++PHQLSGG QRVA A L+IADEP LD + + QI+ L LQA
Sbjct: 410 LGEQFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQA 469
Query: 217 QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
Q A L I+HD+ E++ + VM +G + E G +Q+ HPQ YT+ L+ A
Sbjct: 470 QYGF-ACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAA 524
Score = 93.6 bits (231), Expect = 2e-23
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 25/221 (11%)
Query: 289 LLTVDNIAMHRGEK--CLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLK-PSQ-- 343
LL V+++ + GE D LSF+++ GEI+ + G+SG GK+ A +GLL P Q
Sbjct: 7 LLNVEHLKIRVGEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVC 66
Query: 344 -GRI------------HRLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHS---- 386
GR+ L+AI ++Q+P +L ++ + + + + H+
Sbjct: 67 GGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDP 126
Query: 387 -VERSQIPRLLERLAL--SPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRL 443
R + +L R+ + + L +Q SGG QR + +L RP LL+ADEPT+ L
Sbjct: 127 PQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTAL 186
Query: 444 DPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
D + ++L++ELT+E G A++ ISHD + + H+V+
Sbjct: 187 DCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVV 227