Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  202 bits (514), Expect = 3e-56
 Identities = 165/509 (32%), Positives = 243/509 (47%), Gaps = 75/509 (14%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V  L   L   + L ++GE+G GKS  A A++  L  G   +G I   G+     + A+ 
Sbjct: 33  VRGLDLTLQRGETLALVGESGCGKSTTALALLRLLAPGAVLRGSIQFDGRDILALSPAQL 92

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALT--DSAFQQVAL-- 161
             + G++++++ QEP  +LNP+   G Q+ E  R     H   +AL     A + + L  
Sbjct: 93  REVRGREISMIFQEPMTSLNPVHTIGTQIEETLR----RHEKLSALAARKRAIELLDLVR 148

Query: 162 ----HQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQ 217
               HQ +  +PH LSGG  QRV    A   +  LL+ADEPT  LD + + QI+ LL   
Sbjct: 149 IPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADEPTTALDVTIQAQILELLDG- 207

Query: 218 LTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINAD- 273
           L R    ALL ITHD+ +  +    + VM  G   E+    ++ + P   YT+ L+ A  
Sbjct: 208 LRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTSRLFAAPSHAYTRGLLGASL 267

Query: 274 -----------------PRYWPTT-----------PQSKT---------GEPLLTVDNIA 296
                             R    T           P SK           EPLL+V ++ 
Sbjct: 268 HAGSALHYVDARLPEIQTRLDAATGERSFALHVPEPNSKVRALPVRTAAAEPLLSVQDLR 327

Query: 297 MH---RGEKCLF--DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI--HRL 349
                RG   L   D +SF + AGE +G+ G+SGCGKSTL+  LL L+ P+ GRI     
Sbjct: 328 TDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVNPASGRIVFDGT 387

Query: 350 QAIPLG-KALK--------LYQDPPSALAKSVTLQTLLEDVCRQHSV-----ERSQIPRL 395
               L  KALK        ++QDP ++L    ++  ++E V + H V      R++I  +
Sbjct: 388 DIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLKVHGVADRAERRNRIAAI 447

Query: 396 LERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLI 455
           LER+ L  +   R  N+ SGG+ QR  I RAL+ RP+L+V DEP S LD    A  L L+
Sbjct: 448 LERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDEPVSALDVSVQAQILNLL 507

Query: 456 IELTQEIGCALVLISHDKLALEKTCHRVL 484
           +EL ++ G + + ISHD   +     RV+
Sbjct: 508 VELKEDFGLSYLFISHDLSVVRYIADRVM 536



 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 21/258 (8%)

Query: 30  LLSVQQLAISTAQET-----LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGL 84
           LLSVQ L     +        V+ +SF++ A + + ++GE+G GKS L+  ++  +    
Sbjct: 320 LLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVNP-- 377

Query: 85  RSQGKIALFGQYQHQRTQAEREAL--WGKQLAVLPQEPWHALNP---IMRAGEQVAEVHR 139
            + G+I   G       Q   +AL  W +++ ++ Q+P+ +LNP   +    E V +VH 
Sbjct: 378 -ASGRIVFDGT---DIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLKVHG 433

Query: 140 LVMGNHAASAALTDSAFQQVALHQDLSK-YPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
           +   + A       +  ++V L  D  + +P++ SGG  QR+    A   +  L++ DEP
Sbjct: 434 VA--DRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDEP 491

Query: 199 TKGLDASRRDQIIALLQAQLTRGAL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
              LD S + QI+ LL        L  L I+HD+ V   +   ++VM KG I E G  + 
Sbjct: 492 VSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHRD 551

Query: 257 VLSHPQSDYTKALINADP 274
           +   PQ  YT++LI A P
Sbjct: 552 IWDRPQHPYTRSLIAAVP 569