Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  206 bits (524), Expect = 2e-57
 Identities = 155/499 (31%), Positives = 248/499 (49%), Gaps = 50/499 (10%)

Query: 28  TALLSVQ--QLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGL- 84
           T L+SV+   LA+      +V ++SF++   + + I+GE+GSGK+  A AI+G  P  L 
Sbjct: 9   TPLVSVEGLTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLV 68

Query: 85  RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLV 141
           R+ G+I   G+   Q   A    L G ++ ++ QEP  +LNP M  G+Q+ E   +HR  
Sbjct: 69  RTAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRD 128

Query: 142 MGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
           +   A    + D    +V +      L  +PH+ SGGM QR+        +  LLIADEP
Sbjct: 129 LSPAARRERILDM-LARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEP 187

Query: 199 TKGLDASRRDQIIALLQAQLT--RGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
           T  LDA  +  ++ L+       R A+L I+HD+ +  +    ++VMR G + E G    
Sbjct: 188 TTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDD 247

Query: 257 VLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM-HRGEKCLF---------D 306
           +L  P+  YT+ L+ A P   P   Q     P++ V N+ + + G + LF          
Sbjct: 248 MLEQPRHAYTRELLQAMPHRLPAR-QVPDEAPVVEVRNLVVDYAGHRRLFAKTVPKRALH 306

Query: 307 SLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------------HRLQ 350
            +   +   E++ + G SG GK+TL   + GLL+PS G I                +RLQ
Sbjct: 307 GIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILRSDAGWSDYRLQ 366

Query: 351 AIPLGKALKLYQDPPSALAKSVTLQTLLEDVCR----QHSVERSQ-IPRLLERLALSPNL 405
                    ++QDP ++L   +T+  L+ +  R      + +R++ +  +LE + L    
Sbjct: 367 C------QMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGF 420

Query: 406 LSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCA 465
             R A+++SGG+ QR AI RA++ RP  ++ADEP S LD    A  L L  EL +  G +
Sbjct: 421 APRYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFS 480

Query: 466 LVLISHDKLALEKTCHRVL 484
            + ISHD   +E+   RV+
Sbjct: 481 CLFISHDLGVVEQVADRVV 499



 Score =  114 bits (286), Expect = 7e-30
 Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 17/264 (6%)

Query: 24  KNIVTALLSVQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNL-PA 82
           +N+V      ++L   T  +  +  +   +   + + ++G +GSGK+ L   I G L P+
Sbjct: 283 RNLVVDYAGHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPS 342

Query: 83  GLRSQGKIALFGQYQHQRTQAEREALWGK---QLAVLPQEPWHALNPIMRAGEQVAEVHR 139
           G    G+I   G     R     +A W     Q  ++ Q+P+ +L+P M  G+ V E  R
Sbjct: 343 G----GEIMFRG-----RPILRSDAGWSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLR 393

Query: 140 LVMGNHAASAAL-TDSAFQQVALHQDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADE 197
           LV G   A  A       ++V L    + +Y H+LSGG  QRVA   A   +   +IADE
Sbjct: 394 LVKGMSTADRARRVQEVLEEVGLGTGFAPRYAHELSGGQRQRVAIARAIVRRPAFVIADE 453

Query: 198 PTKGLDASRRDQIIALL-QAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           P   LD + R Q++AL  + Q   G + L I+HD+ V E++   ++VM+ G I EQG   
Sbjct: 454 PVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRD 513

Query: 256 QVLSHPQSDYTKALINADPRYWPT 279
            V   P  DYT+ L++A P   PT
Sbjct: 514 TVFDAPTQDYTRKLLSAIPALEPT 537