Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA from Variovorax sp. SCN45

 Score =  215 bits (548), Expect = 3e-60
 Identities = 170/534 (31%), Positives = 263/534 (49%), Gaps = 87/534 (16%)

Query: 30  LLSVQQLAI--STAQETL--VESLSFELHAHQALTILGETGSGKSLLANA---------- 75
           +L+V  L +  ST++ T+  V+ LSF +   + L ++GE+GSGKS+ + A          
Sbjct: 13  VLAVDDLTVRFSTSERTVDAVKKLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGG 72

Query: 76  -IIGNLPAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQV 134
            I+G   A  R  G++    Q +    +  R    G  +A++ QEP  +LNP+  AG+Q+
Sbjct: 73  RILGGSMAFRRRNGEVLDLAQARDSTMRGIR----GADIAMIFQEPMTSLNPVFTAGDQI 128

Query: 135 AEVHRLVMGNHAASAALTDSAFQQVAL------HQDLSKYPHQLSGGMAQRVAYLCATQT 188
           AE  R+  G   + +A    A + + L         L ++PHQLSGGM QRV    A   
Sbjct: 129 AEAIRIHQGK--SDSAARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSC 186

Query: 189 QAPLLIADEPTKGLDASRRDQIIAL---LQAQLTRGALLTITHDIEVAEKLGGTIIVMRK 245
           +  LLIADEPT  LD + + QI+ L   LQ ++  G L  ITHD+ V  ++   ++VM +
Sbjct: 187 KPQLLIADEPTTALDVTIQAQILQLIRELQKEMRMGVLF-ITHDMGVVAEIADRVLVMYR 245

Query: 246 GVIQEQGPAQQVLSHPQSDYTKALINADPRYW--------------------------PT 279
           G   E G +  V + PQ  YT+AL++A P+                            P 
Sbjct: 246 GDKVEAGSSDTVFAAPQHPYTRALLSAVPKLGAMQGTDLPAKFDLLRTESPADAAPPEPA 305

Query: 280 TPQSKTGE---PLLTV-DNIAMHRGEKCLF----------DSLSFTLSAGEILGISGDSG 325
           TPQ    E   P+L V D +        LF          + +SF L  GE L + G+SG
Sbjct: 306 TPQDTVREDAGPILRVRDLVTRFDVRSGLFGRVKRRVHAVEKISFDLYPGETLALVGESG 365

Query: 326 CGKSTLADLLLGLLKPSQGRI----HRLQAIPLG--KALK-----LYQDPPSALAKSVTL 374
           CGKST    LL L++   G I      ++ +P    +AL+     ++QDP ++L   VT+
Sbjct: 366 CGKSTTGRSLLRLVESQSGAIEFGGQNIRELPTRELQALRRNIQFIFQDPFASLDPRVTV 425

Query: 375 QTLLEDVCRQHSVER-----SQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLT 429
              + +    H + +      ++  LL+++ L P +  R  ++ SGG+ QR AI RAL  
Sbjct: 426 GFSIMEPLLIHGIAKGAEAQQRVDWLLQKVGLPPEVAQRYPHEFSGGQRQRIAIARALAL 485

Query: 430 RPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
            P ++VADE  S LD    A  + L+++L +E+G A + ISHD   +E+  HRV
Sbjct: 486 NPKVVVADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRV 539



 Score =  105 bits (263), Expect = 3e-27
 Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           VE +SF+L+  + L ++GE+G GKS    +++  + +     G I   GQ   +    E 
Sbjct: 345 VEKISFDLYPGETLALVGESGCGKSTTGRSLLRLVES---QSGAIEFGGQNIRELPTREL 401

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
           +AL  + +  + Q+P+ +L+P +  G  + E   +H +  G  A      D   Q+V L 
Sbjct: 402 QAL-RRNIQFIFQDPFASLDPRVTVGFSIMEPLLIHGIAKGAEAQQRV--DWLLQKVGLP 458

Query: 163 QDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL-LQAQLTR 220
            +++ +YPH+ SGG  QR+A   A      +++ADE    LD S + QI+ L L  Q   
Sbjct: 459 PEVAQRYPHEFSGGQRQRIAIARALALNPKVVVADESVSALDVSIQAQIVNLMLDLQREL 518

Query: 221 G-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
           G A L I+HD+ V E++   + VM  G I E GP + V   PQ  YT+ L+ A P
Sbjct: 519 GVAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEAPQHAYTRKLMAAVP 573



 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 29/206 (14%)

Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI--------------------- 346
           LSF +  GE L + G+SG GKS  +  L+ L++   GRI                     
Sbjct: 36  LSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGGRILGGSMAFRRRNGEVLDLAQAR 95

Query: 347 -HRLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQH-----SVERSQIPRLLE--R 398
              ++ I       ++Q+P ++L    T    + +  R H     S  R++  R+LE  R
Sbjct: 96  DSTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEAIRIHQGKSDSAARAEALRMLELVR 155

Query: 399 LALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIEL 458
           +  + N+L R  +Q+SGG  QR  I  AL  +P LL+ADEPT+ LD    A  LQLI EL
Sbjct: 156 IPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLIADEPTTALDVTIQAQILQLIREL 215

Query: 459 TQEIGCALVLISHDKLALEKTCHRVL 484
            +E+   ++ I+HD   + +   RVL
Sbjct: 216 QKEMRMGVLFITHDMGVVAEIADRVL 241