Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  236 bits (601), Expect = 2e-66
 Identities = 169/497 (34%), Positives = 263/497 (52%), Gaps = 46/497 (9%)

Query: 30  LLSVQQLAIS-TAQETLVESL---SFELHAHQALTILGETGSGKSLLANAIIGNLP--AG 83
           LL V+ L++S T  + +V+++   SF++   + L I+GE+GSGKS+  NA++  LP  A 
Sbjct: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65

Query: 84  LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRL 140
           +  +  I   G+    +T  +   + G ++ ++ QEP  +LNP MR G QVAE    HR 
Sbjct: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125

Query: 141 VMGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADE 197
           V  N A    L    FQ V L        K+PH+ SGG  QR+    A   +  +LIADE
Sbjct: 126 VSQNQAKQRVL--ELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADE 183

Query: 198 PTKGLDASRRDQIIALL-QAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           PT  LD + + +++ L+ + Q   G A+L ITHD+ V + +   ++VM KG + EQG  +
Sbjct: 184 PTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTE 243

Query: 256 QVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKCLFDS-------- 307
           Q+   P+ DYT+ LIN+ P+     P +    PLL  ++I +    K  F S        
Sbjct: 244 QLFLQPEHDYTRMLINSIPK-GSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFEA 302

Query: 308 ---LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQAIPL 354
              +S  L  GE LGI G+SG GKSTL   L+GLL PS G+I             Q + L
Sbjct: 303 VKGISLELKQGETLGIVGESGSGKSTLGRALIGLL-PSTGQIAFKGQDFRALSEKQRLAL 361

Query: 355 GKALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERSQIPRL------LERLALSPNLLS 407
            K +++ +QDP  +L+  +T+  ++ +    H    S++ R+      LE + L PN ++
Sbjct: 362 KKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSIN 421

Query: 408 RKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALV 467
           R  ++ SGG+ QR AI RAL+  P+ ++ DEPTS LD     + ++L+ E+ +      +
Sbjct: 422 RYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYL 481

Query: 468 LISHDKLALEKTCHRVL 484
            ISHD   ++    RVL
Sbjct: 482 FISHDLAVVKALSDRVL 498



 Score =  127 bits (318), Expect = 1e-33
 Identities = 86/233 (36%), Positives = 131/233 (56%), Gaps = 12/233 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ +S EL   + L I+GE+GSGKS L  A+IG LP    S G+IA  GQ     ++ +R
Sbjct: 303 VKGISLELKQGETLGIVGESGSGKSTLGRALIGLLP----STGQIAFKGQDFRALSEKQR 358

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSA---FQQVALH 162
            AL  K + ++ Q+P+ +L+P M  GE + E   LV   H +       A    ++V L 
Sbjct: 359 LAL-KKDIQMVFQDPYGSLSPRMTVGEIITE-GLLVHQPHISKLERMQRARRALEEVRLD 416

Query: 163 QD-LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRG 221
            + +++YPH+ SGG  QR+A   A   +   ++ DEPT  LD S +  +I LL+    R 
Sbjct: 417 PNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRR 476

Query: 222 AL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
            +  L I+HD+ V + L   ++VM+KG + EQG A+ +  +PQ +YTK LI A
Sbjct: 477 NIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529