Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (545), Expect = 6e-60
 Identities = 161/526 (30%), Positives = 258/526 (49%), Gaps = 73/526 (13%)

Query: 29  ALLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNL-PAG 83
           +LL V+ L I           V+SL+ ++   + + ++GE+G+GKS + NA+I  L P G
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 84  LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRL 140
             + G++ L G+     +      + G ++  + Q+P  +LNP+     Q+ E    +  
Sbjct: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 141 VMGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADE 197
           V    A   AL  S  +QV + Q    L +YPHQ SGGM QRV    A   +  L+IADE
Sbjct: 122 VSAEEAYQRAL--SLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADE 179

Query: 198 PTKGLDASRRDQIIALLQAQLTRG--ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           PT  LD S +DQI+ L++    +     + +THD+ V   +   + VM +G + E GP  
Sbjct: 180 PTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTA 239

Query: 256 QVLSHPQSDYTKALINADPR---------------------------YWPTTPQS--KTG 286
           +VL  P+  YT++LI+A PR                           +W    Q   K  
Sbjct: 240 KVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYT 299

Query: 287 EPLLTVDNIAMHRGEK-CLFDS----------LSFTLSAGEILGISGDSGCGKSTLADLL 335
            PLL V+N+ +    K  LF+S          +SF +  GE  G+ G+SG GKST+A ++
Sbjct: 300 GPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVI 359

Query: 336 LGLLKPSQGRI-----------HRLQAIPLGKALKL-YQDPPSALAKSVTLQTLLEDVCR 383
            GL +P+ GR+              +  PL + +++ +Q+P +++   + +  ++ +  R
Sbjct: 360 AGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIR 419

Query: 384 QHSVERSQ------IPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVAD 437
            H + RS+      +  LLE + L      +  ++ SGG+ QR +I RAL TRP LL+ D
Sbjct: 420 FHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICD 479

Query: 438 EPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
           EPTS LD    A  L L+ +L  E+   ++ ISHD   + + C RV
Sbjct: 480 EPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRV 525



 Score =  109 bits (273), Expect = 2e-28
 Identities = 75/237 (31%), Positives = 129/237 (54%), Gaps = 14/237 (5%)

Query: 48  SLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFG-QYQHQRTQAERE 106
           ++SF +H  +   ++GE+GSGKS +A  I G       + G++   G      +++ ER 
Sbjct: 331 NVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQP---NAGRVTFEGIDLTALKSEHERR 387

Query: 107 ALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALHQ 163
            L  +Q+ ++ Q P+ ++NP M+  + +AE    H+L   + + +  + +   + V L +
Sbjct: 388 PL-RRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTR-SESETRQIVNDLLEHVGLGK 445

Query: 164 DLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL---LQAQLT 219
               KYPH+ SGG  QR++   A  T+  LLI DEPT  LD S + QI+ L   LQ +L 
Sbjct: 446 MAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELN 505

Query: 220 RGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRY 276
              +L I+HD+ V  ++   + VM+ G + E  P +Q+ + PQ +Y+K LI+  P +
Sbjct: 506 L-TMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMPEF 561