Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  218 bits (554), Expect = 5e-61
 Identities = 158/495 (31%), Positives = 257/495 (51%), Gaps = 44/495 (8%)

Query: 30  LLSVQQLAISTAQ----ETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGL- 84
           L+ V+ LA+          +V+ +SF++   + L ++GE+GSGKS+ A++I+  LP  L 
Sbjct: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65

Query: 85  -RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRL 140
               G I   G+   Q+++   + + G ++A++ QEP  +LNP+    +Q+ E+   H+ 
Sbjct: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125

Query: 141 VMGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADE 197
           + G  A +  L       V + +    L   PH+LSGG  QRV    A   +  LLIADE
Sbjct: 126 LTGKEATARTL--ELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183

Query: 198 PTKGLDASRRDQIIALLQAQLTRG--ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           PT  LD + + +I+ LL+    R   ALL I+HD+ +  ++   + VM++G I EQ    
Sbjct: 184 PTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECA 243

Query: 256 QVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKCLF---------- 305
            + S PQ  YT+ LINA+P   P    +  G PLL VD++ +    K  F          
Sbjct: 244 TLFSSPQHHYTQMLINAEPSGLPA--HNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKA 301

Query: 306 -DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQG-RIH--RLQAI------PLG 355
            D ++F+L  G+ LGI G+SG GKSTL   +L L+    G R H   L+ +      PL 
Sbjct: 302 VDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLR 361

Query: 356 KALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERSQ-----IPRLLERLALSPNLLSRK 409
           + +++ +QDP  +L+  + +  ++ +  R H +  +Q     I   LE + L P    R 
Sbjct: 362 REMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRY 421

Query: 410 ANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLI 469
            ++ SGG+ QR AI RAL+ +P L++ DEPTS LD       ++L+  L Q+     + I
Sbjct: 422 PHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFI 481

Query: 470 SHDKLALEKTCHRVL 484
           SHD   ++   H+++
Sbjct: 482 SHDLAVVKALSHQLM 496



 Score =  110 bits (276), Expect = 9e-29
 Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 13/233 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ ++F L   Q L I+GE+GSGKS L  AI+  +     SQG I   GQ      Q   
Sbjct: 302 VDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLIS----SQGGIRFHGQNLEGLNQKAV 357

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
             L  +++ V+ Q+P+ +L+P M   + V E   +HR+       +A +  +A ++V L 
Sbjct: 358 RPL-RREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAII--AALEEVGLD 414

Query: 163 -QDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQ--AQLT 219
            +   +YPH+ SGG  QR+A   A   +  L++ DEPT  LD + + Q++ LL+   Q  
Sbjct: 415 PRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKY 474

Query: 220 RGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
               L I+HD+ V + L   ++V++ G + EQG AQ +   PQ  YT+ L+ A
Sbjct: 475 NLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527