Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  237 bits (604), Expect = 9e-67
 Identities = 173/493 (35%), Positives = 258/493 (52%), Gaps = 37/493 (7%)

Query: 30  LLSVQQLAISTA----QETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           L+ V+ L++S +    +   +  LSF L   + L ++GE+GSGKS LANA++G LP   R
Sbjct: 6   LIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGNAR 65

Query: 86  -SQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGN 144
             QG++ + G    Q ++  R  L G+ + ++PQ+P  +LNP  R G+Q+AE  +L  G 
Sbjct: 66  IDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARGR 125

Query: 145 -HAASAALTDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
            +    A   +   QV L +   +   YPH+LSGGM QRV    A   +  L+IADEPT 
Sbjct: 126 RYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLIIADEPTS 185

Query: 201 GLDASRRDQIIALLQAQLT-RG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVL 258
            LD + + +I+  LQ  +  RG +LL ITHD+ +A      ++VM++G   E G  +Q+L
Sbjct: 186 ALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGSPRQIL 245

Query: 259 SHPQSDYTKALINADPRYWPTT-PQSKTGE-PLLTVDNIAMH------RGEKCLFDSLSF 310
              +  YT+AL++A P + P   P +  G+ PLL + ++                  LS 
Sbjct: 246 WGARQPYTRALLDAAPAFVPRRRPAAPRGQTPLLRLSHVGKRFELPGKNEHYTALHDLSL 305

Query: 311 TLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIHRL----------QAIPLGKALKL 360
            L AG+ L I G+SG GKST   + LGL KPSQG++             Q  PL + ++L
Sbjct: 306 ELHAGQTLAIVGESGSGKSTALRIALGLEKPSQGQVVFAGEDVTGYTWSQFRPLRRRIQL 365

Query: 361 YQ-------DPPSALAKSVTLQTLLEDVCRQHSVERSQIPRLLERLALSPNLLSRKANQV 413
            Q       DP   +  SV    +   + R  ++ER +   L+ R+ L    L R   ++
Sbjct: 366 VQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALER-KARELITRVQLPVQFLDRLPREL 424

Query: 414 SGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDK 473
           SGG+ QR AI RAL   P +L+ DEP S LD    A  L L+ EL +E+G A VL+SHD 
Sbjct: 425 SGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGMAYVLVSHDL 484

Query: 474 LALEKTCHRVLSL 486
             +     +VL L
Sbjct: 485 AVVASMADQVLVL 497



 Score =  117 bits (292), Expect = 1e-30
 Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 12/237 (5%)

Query: 44  TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQA 103
           T +  LS ELHA Q L I+GE+GSGKS      +G       SQG++   G+     T +
Sbjct: 298 TALHDLSLELHAGQTLAIVGESGSGKSTALRIALG---LEKPSQGQVVFAGEDVTGYTWS 354

Query: 104 EREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVALHQ 163
           +   L  +++ ++ Q P+ AL+P     + V E   LV        AL   A + +   Q
Sbjct: 355 QFRPL-RRRIQLVQQNPFAALDPRFTVFDSVVEP--LVSFGLLRGEALERKARELITRVQ 411

Query: 164 ----DLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALL-QAQL 218
                L + P +LSGG  QRVA   A   +  +L+ DEP   LD S + QI+ALL + Q 
Sbjct: 412 LPVQFLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQR 471

Query: 219 TRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
             G A + ++HD+ V   +   ++V+R+G + EQGPA QVLS   S YT+ALI+A P
Sbjct: 472 ELGMAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDAIP 528