Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., putative ABC transporter ATP-binding protein YejF from Pseudomonas sp. DMC3

 Score =  205 bits (522), Expect = 3e-57
 Identities = 147/487 (30%), Positives = 247/487 (50%), Gaps = 34/487 (6%)

Query: 30  LLSVQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAG-LRSQG 88
           L+ ++ L ++   +T+V  L  ++   + L ++GE+GSGKS+ A++I+  LP    +++G
Sbjct: 5   LIEIRNLNVAFHGQTVVRDLCLDIRPGECLALVGESGSGKSVTAHSILQLLPESEAQTRG 64

Query: 89  KIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNH 145
            I   GQ            L G ++A++ QEP  +LNP+    +Q+ E   +HR + G  
Sbjct: 65  SIRYRGQELLGADPKVLRELRGNRIAMIFQEPMTSLNPLHTIEKQIGETLLLHRGLGGKQ 124

Query: 146 AASAALTDSAFQQVALHQD-LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDA 204
           A    L       +   ++ L  YPHQLSGG  QRV    A   +  LLIADEPT  LD 
Sbjct: 125 AQQRILELLGLVGIQKPKERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDV 184

Query: 205 SRRDQIIALLQAQLTR--GALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQ 262
           + + +I+ LL++   R   +LL I+HD+ +   +   + VM+ G I EQ P + + + P+
Sbjct: 185 TVQRKILLLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMKAGQIVEQAPCETLFTEPK 244

Query: 263 SDYTKALINADPRYWPTTPQSKTGEPLLTVD-------NIAMHRGEKCL--FDSLSFTLS 313
             Y+  L+NA+P      P+ +    L   D          + R ++ L   D +S  + 
Sbjct: 245 HPYSCVLLNAEPE-GEALPRDERENVLEVADLRVDFQVGGGLFRRKQYLRAVDGISLNIQ 303

Query: 314 AGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQAIPLGKALKL-YQ 362
            G+ LGI G+SG GKSTL   +L LL  S+G I          ++ Q  P  + +++ +Q
Sbjct: 304 RGKTLGIVGESGSGKSTLGQAILRLLD-SEGSIRFQGEALDGLNQKQLRPWRRQMQVVFQ 362

Query: 363 DPPSALAKSVTLQTLLEDVCRQHSVERS-----QIPRLLERLALSPNLLSRKANQVSGGE 417
           DP  +L+  +++  ++ +    H    +     Q+ R+L  + L P    R  ++ SGG+
Sbjct: 363 DPFGSLSPRMSVAQIISEGLEVHCESTANECDKQVIRVLREVGLDPESRHRYPHEFSGGQ 422

Query: 418 LQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALE 477
            QR AI RAL+ +P L++ DEPTS LD       + L+ +L ++ G   + ISHD   + 
Sbjct: 423 RQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRDLQEKYGLTYLFISHDLAVVR 482

Query: 478 KTCHRVL 484
              H ++
Sbjct: 483 ALAHDMI 489



 Score =  110 bits (274), Expect = 2e-28
 Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 17/235 (7%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPA--GLRSQGKIALFGQYQHQRTQA 103
           V+ +S  +   + L I+GE+GSGKS L  AI+  L +   +R QG+ AL G  Q Q    
Sbjct: 295 VDGISLNIQRGKTLGIVGESGSGKSTLGQAILRLLDSEGSIRFQGE-ALDGLNQKQLRP- 352

Query: 104 EREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVA 160
                W +Q+ V+ Q+P+ +L+P M   + ++E   VH     N      +     ++V 
Sbjct: 353 -----WRRQMQVVFQDPFGSLSPRMSVAQIISEGLEVHCESTANECDKQVIR--VLREVG 405

Query: 161 LH-QDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLT 219
           L  +   +YPH+ SGG  QR+A   A   +  L++ DEPT  LD + + Q++ALL+    
Sbjct: 406 LDPESRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRDLQE 465

Query: 220 RGAL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
           +  L  L I+HD+ V   L   +IV++ G + E+G +  V  +PQ  YTK L+ A
Sbjct: 466 KYGLTYLFISHDLAVVRALAHDMIVIKDGQVVERGASHDVFDNPQHPYTKELLAA 520