Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  208 bits (530), Expect = 3e-58
 Identities = 153/481 (31%), Positives = 235/481 (48%), Gaps = 48/481 (9%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ +S  +   + + ++GE+GSGKS+ A +I+  L    ++ G +   G+    +++ E 
Sbjct: 8   VDDVSLAIGRGERVALVGESGSGKSVTALSIL-RLLNDAQTSGAVRFDGEDLLMKSEREM 66

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
             L G  +A++ QEP  ALNP+   GEQ+AE   +H  V    A   A+  +  ++  + 
Sbjct: 67  RGLRGSDIAMIFQEPMTALNPLYTIGEQIAETIVMHDGVSAGEARKRAV--ALLERTGIT 124

Query: 163 QD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALL----- 214
           +    ++ YPHQLSGG  QR     A   +  LL+ADEPT  LD + R QI+ LL     
Sbjct: 125 EPGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLELQR 184

Query: 215 -QAQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINAD 273
            +A+    A+L ITHD+ +       + VM KGV+ E GP + +   PQ  YT+ L+ + 
Sbjct: 185 EEAEKRGMAVLLITHDLNLVRHFAQRVAVMEKGVLVESGPVETLFESPQHPYTQRLLQSR 244

Query: 274 PRYWPTTPQSKTGEPLLTVDNIAM-------------HRGEKCLFDSLSFTLSAGEILGI 320
           P      P       LL   ++++               G        + ++  GE LGI
Sbjct: 245 PER-AVVPVLPIAPVLLDARDVSVDFRTKLPGFSGWFRSGHFRAVADATVSVRQGETLGI 303

Query: 321 SGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIPLGK-------ALK-----LYQDPPSAL 368
            G+SG GKSTLA  LLGL K S G I   Q   LG        AL+     ++QDP S+L
Sbjct: 304 VGESGSGKSTLAMALLGLQKTSHGAIE-FQGRALGSYRGREQTALRSNMQVVFQDPFSSL 362

Query: 369 AKSVTLQTLLEDVCRQHSVE------RSQIPRLLERLALSPNLLSRKANQVSGGELQRFA 422
           +   T++ ++ +    H  E      R ++  +L  + +    L R  ++ SGG+ QR A
Sbjct: 363 SPRQTIERIVGEGLALHKPELAPDARRDKVISVLREVGIDRTALQRYPHEFSGGQRQRIA 422

Query: 423 ILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHR 482
           I RAL+  P +L+ DEPTS LD       L+L+  L ++     V ISHD   +    HR
Sbjct: 423 IARALVLEPRILILDEPTSALDVSIQQQVLKLLAGLQRKYNLGFVFISHDLAVIGAMAHR 482

Query: 483 V 483
           V
Sbjct: 483 V 483



 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 11/222 (4%)

Query: 57  QALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVL 116
           + L I+GE+GSGKS LA A++G       S G I   G+        E+ AL    + V+
Sbjct: 299 ETLGIVGESGSGKSTLAMALLGLQKT---SHGAIEFQGRALGSYRGREQTAL-RSNMQVV 354

Query: 117 PQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALHQD-LSKYPHQL 172
            Q+P+ +L+P       V E   +H+  +   A    +  S  ++V + +  L +YPH+ 
Sbjct: 355 FQDPFSSLSPRQTIERIVGEGLALHKPELAPDARRDKVI-SVLREVGIDRTALQRYPHEF 413

Query: 173 SGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRGAL--LTITHDI 230
           SGG  QR+A   A   +  +LI DEPT  LD S + Q++ LL     +  L  + I+HD+
Sbjct: 414 SGGQRQRIAIARALVLEPRILILDEPTSALDVSIQQQVLKLLAGLQRKYNLGFVFISHDL 473

Query: 231 EVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
            V   +   + VM+ G I E G   Q+ + P   YT+ L+ A
Sbjct: 474 AVIGAMAHRVAVMQNGEIVETGEVDQIFAEPSHPYTRKLLKA 515



 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 300 GEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQ--GRI----------- 346
           G     D +S  +  GE + + G+SG GKS  A  +L LL  +Q  G +           
Sbjct: 3   GNTVAVDDVSLAIGRGERVALVGESGSGKSVTALSILRLLNDAQTSGAVRFDGEDLLMKS 62

Query: 347 -HRLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQH-----SVERSQIPRLLERLA 400
              ++ +       ++Q+P +AL    T+   + +    H        R +   LLER  
Sbjct: 63  EREMRGLRGSDIAMIFQEPMTALNPLYTIGEQIAETIVMHDGVSAGEARKRAVALLERTG 122

Query: 401 LSP--NLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIEL 458
           ++     ++   +Q+SGG+ QR  I  AL  RP LL+ADEPT+ LD    A  ++L++EL
Sbjct: 123 ITEPGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLEL 182

Query: 459 TQE----IGCALVLISHDKLALEKTCHRV 483
            +E     G A++LI+HD   +     RV
Sbjct: 183 QREEAEKRGMAVLLITHDLNLVRHFAQRV 211