Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 558 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49
Score = 234 bits (597), Expect = 6e-66
Identities = 178/512 (34%), Positives = 267/512 (52%), Gaps = 49/512 (9%)
Query: 15 VKFSNAGQRKNIVTALLSVQQLAIS----TAQETLVESLSFELHAHQALTILGETGSGKS 70
+ +A QR + +L ++Q++I+ + +V +SF + + + ++GE+GSGK+
Sbjct: 1 MSIQSALQRASATPPVLELEQVSIAYQGAAGNQRVVHQVSFAIQPGEVVALVGESGSGKT 60
Query: 71 LLANAIIGNLPA-GLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMR 129
A AIIG L G QG I L G + +A+ G Q++++PQ+P +LNP+
Sbjct: 61 TTAQAIIGLLTENGRLEQGAIRLNGTDISHWSSKRLDAVRGAQISLIPQDPSSSLNPVKT 120
Query: 130 AGEQVAEV---HRLVMGNHAASAALTDSAFQQVAL-HQDLS--KYPHQLSGGMAQRVAYL 183
G+QVAE+ HR + + + +V L H +L +YPH+LSGGM QRV
Sbjct: 121 IGDQVAEIINIHRRLPRKQLQQRVV--ALLTRVGLTHPELRARQYPHELSGGMKQRVLIA 178
Query: 184 CATQTQAPLLIADEPTKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTII 241
A Q L+IADEPT LD + + +I+ L+ Q A+L +THD+ VA + ++
Sbjct: 179 IAIALQPALIIADEPTSALDVTVQKRILDLIDELRQEFGTAVLLVTHDLAVAAERADRLL 238
Query: 242 VMRKGVIQEQGPAQQVLSHPQSDYTKALINADP---RYWPTTPQSKTGEPLLTVDNIAMH 298
V R G +QEQG +VL P SDYT+ L P R P +T E + V+ +
Sbjct: 239 VFRHGRVQEQGVTAEVLRAPASDYTRRLFADVPSLSRAVVPQPGHRTQELAIQVNGLVKD 298
Query: 299 -----RGEKCL--FDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----- 346
G K D +SF++ G + G+SG GK+TLA LLG +P G+I
Sbjct: 299 FPLAGSGGKTYRALDQVSFSVPGGTTHALVGESGSGKTTLARCLLGFQRPDAGQIIIDGV 358
Query: 347 --HRLQAIPLGKALK--------LYQDPPSALAKSVTLQTLLEDVCRQHS----VERSQI 392
RL+ G+AL+ +YQ+P +L S TL ++E+ ER +
Sbjct: 359 DFTRLK----GEALRQFRRRIQLVYQNPFGSLDPSQTLYQVIEEPLLNFEPLTQAERYRR 414
Query: 393 PR-LLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAAST 451
R L ER+AL LLSRK ++SGG+ QR AI RAL+ +P +LV DE TS LD A
Sbjct: 415 VRDLFERVALPNELLSRKPRELSGGQRQRVAIARALVLQPRVLVLDEATSALDVTVQAQI 474
Query: 452 LQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
L+L+ +L QE+G + ISHD + + H V
Sbjct: 475 LRLLQDLQQELGLTYLFISHDLATVRQISHSV 506
Score = 93.2 bits (230), Expect = 2e-23
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 27/224 (12%)
Query: 288 PLLTVDNIAMH----RGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS- 342
P+L ++ +++ G + + +SF + GE++ + G+SG GK+T A ++GLL +
Sbjct: 15 PVLELEQVSIAYQGAAGNQRVVHQVSFAIQPGEVVALVGESGSGKTTTAQAIIGLLTENG 74
Query: 343 ---QGRIH------------RLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHS- 386
QG I RL A+ + + QDP S+L T+ + ++ H
Sbjct: 75 RLEQGAIRLNGTDISHWSSKRLDAVRGAQISLIPQDPSSSLNPVKTIGDQVAEIINIHRR 134
Query: 387 VERSQIPR----LLERLALS-PNLLSRK-ANQVSGGELQRFAILRALLTRPTLLVADEPT 440
+ R Q+ + LL R+ L+ P L +R+ +++SGG QR I A+ +P L++ADEPT
Sbjct: 135 LPRKQLQQRVVALLTRVGLTHPELRARQYPHELSGGMKQRVLIAIAIALQPALIIADEPT 194
Query: 441 SRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
S LD L LI EL QE G A++L++HD + R+L
Sbjct: 195 SALDVTVQKRILDLIDELRQEFGTAVLLVTHDLAVAAERADRLL 238
Score = 89.0 bits (219), Expect = 4e-22
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 8/233 (3%)
Query: 46 VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
++ +SF + ++GE+GSGK+ LA ++G G+I + G R + E
Sbjct: 312 LDQVSFSVPGGTTHALVGESGSGKTTLARCLLGFQRP---DAGQIIIDG-VDFTRLKGEA 367
Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE-VHRLVMGNHAASAALTDSAFQQVALHQD 164
+ +++ ++ Q P+ +L+P + + E + A F++VAL +
Sbjct: 368 LRQFRRRIQLVYQNPFGSLDPSQTLYQVIEEPLLNFEPLTQAERYRRVRDLFERVALPNE 427
Query: 165 L-SKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRGAL 223
L S+ P +LSGG QRVA A Q +L+ DE T LD + + QI+ LLQ L
Sbjct: 428 LLSRKPRELSGGQRQRVAIARALVLQPRVLVLDEATSALDVTVQAQILRLLQDLQQELGL 487
Query: 224 --LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
L I+HD+ ++ ++ V+ +GV + G ++ P SDYT+ LI A P
Sbjct: 488 TYLFISHDLATVRQISHSVSVLHRGVQVDSGATDELFVMPGSDYTRQLIEAIP 540