Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., Putative ABC transporter ATP-binding protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  234 bits (596), Expect = 7e-66
 Identities = 169/502 (33%), Positives = 267/502 (53%), Gaps = 44/502 (8%)

Query: 26  IVTALLSVQQLAISTAQET----LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLP 81
           + + LL+++ L++   Q+     +V ++S +++A + L ++GE+GSGKS+ A +I+  LP
Sbjct: 1   MTSPLLAIENLSVGFRQQQHVRPVVNAISLQVNAGETLALVGESGSGKSVTALSILRLLP 60

Query: 82  A--GLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHR 139
               +   G I   G+     ++     + G ++A++ QEP  +LNP+    +Q+ EV  
Sbjct: 61  TPPAVYLSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS 120

Query: 140 LVMG-NHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIA 195
           L  G +  A+ A       +V + Q    L  YPHQLSGG  QRV    A  T+  LLIA
Sbjct: 121 LHRGMSREAARAEMIGCLDRVGIRQASQRLRDYPHQLSGGERQRVMIAMALLTRPELLIA 180

Query: 196 DEPTKGLDASRRDQIIALL---QAQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQG 252
           DEPT  LD S + QI++LL   Q +L  G LL ITH++ + +KL  ++ VM+ G   E  
Sbjct: 181 DEPTTALDVSVQAQILSLLRELQRELNMG-LLFITHNLSIVKKLADSVAVMQHGKCVENQ 239

Query: 253 PAQQVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM----HRG-------E 301
            A  +LS P   YT+ L+N++P   P  P      PLL VD + +     +G        
Sbjct: 240 RADTLLSAPTHPYTQKLLNSEPTGDPV-PLPAGQAPLLEVDKLRVAFPIRKGILKRVVDH 298

Query: 302 KCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQA 351
             + +++SFTL  GE LG+ G+SG GKST    LL L++ S+GRI          +R Q 
Sbjct: 299 NVVVNNISFTLHPGETLGLVGESGSGKSTTGLALLRLIR-SEGRIVFDGQSLDTLNRRQL 357

Query: 352 IPLGKALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERS------QIPRLLERLALSPN 404
           +P+   +++ +QDP S+L   + +  ++E+  R H    S      Q+  ++  + L P 
Sbjct: 358 LPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSGAQREQQVKAVMMEVGLDPE 417

Query: 405 LLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGC 464
              R   + SGG+ QR A+ RAL+ +P+L++ DEPTS LD    A  L L+  L Q+   
Sbjct: 418 TRHRYPAEFSGGQRQRIAVARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHRL 477

Query: 465 ALVLISHDKLALEKTCHRVLSL 486
           A + ISHD   +   CH+V+ L
Sbjct: 478 AYIFISHDLHVVRALCHQVIVL 499



 Score =  107 bits (268), Expect = 8e-28
 Identities = 78/233 (33%), Positives = 128/233 (54%), Gaps = 14/233 (6%)

Query: 45  LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAE 104
           +V ++SF LH  + L ++GE+GSGKS    A++  +    RS+G+I   GQ     T   
Sbjct: 301 VVNNISFTLHPGETLGLVGESGSGKSTTGLALLRLI----RSEGRIVFDGQSLD--TLNR 354

Query: 105 REALWGK-QLAVLPQEPWHALNP---IMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVA 160
           R+ L  + ++ V+ Q+P  +LNP   +++  E+   VH+  +   A       +   +V 
Sbjct: 355 RQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSG-AQREQQVKAVMMEVG 413

Query: 161 LHQDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQA--Q 217
           L  +   +YP + SGG  QR+A   A   +  L+I DEPT  LD + + QI+ALL++  Q
Sbjct: 414 LDPETRHRYPAEFSGGQRQRIAVARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQ 473

Query: 218 LTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALI 270
             R A + I+HD+ V   L   +IV+R+G + EQG  ++V + PQ  YT+ L+
Sbjct: 474 KHRLAYIFISHDLHVVRALCHQVIVLRQGEVVEQGQCERVFTAPQQAYTRQLL 526