Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., microcin C ABC transporter ATP-binding protein YejF from Erwinia tracheiphila SCR3

 Score =  227 bits (578), Expect = 9e-64
 Identities = 171/501 (34%), Positives = 262/501 (52%), Gaps = 48/501 (9%)

Query: 29  ALLSVQQLAIS----TAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAG- 83
           +LL+++ L+I+     A   +V++LS  + A + L ++GE+GSGKS+ A +I+  LP   
Sbjct: 2   SLLTIKNLSIAFREGAASRQVVDNLSLSVAAGETLALVGESGSGKSVTALSIMRLLPEPP 61

Query: 84  -LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HR 139
            +  QG+I   G    + ++    AL G ++A++ QEP  +LNP+    +Q+ EV   HR
Sbjct: 62  VIYPQGEIMFAGNDLLKASENTLRALRGNRIAMIFQEPMVSLNPLHNIEKQLYEVLSLHR 121

Query: 140 LVMGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIAD 196
             M   AA A + +    +V + Q    L+ +PHQLSGG  QRV    A  TQ  LLIAD
Sbjct: 122 R-MRKEAARAEMLN-CLDRVGIRQASKRLNAFPHQLSGGERQRVMIAMALLTQPALLIAD 179

Query: 197 EPTKGLDASRRDQIIALLQA---QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGP 253
           EPT  LD + + QI+ LL+    +L  G LL ITH++ +  +L   + VM+ G   E   
Sbjct: 180 EPTTALDVTVQAQILVLLKELKQELNMG-LLFITHNLNIVRQLADNVAVMQNGQNVESNS 238

Query: 254 AQQVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKC---------- 303
            QQ+ S P   YT+AL++A+P   P  P      PLL V  + ++   K           
Sbjct: 239 WQQLFSAPSHPYTRALLDAEPDGLPA-PCDTLARPLLRVQALTVYLPVKRSLMRRTDEPY 297

Query: 304 -LFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQAI 352
               SLSFTL +GE LG+ G+SG GKST    LL L+  SQG I           R + +
Sbjct: 298 HALKSLSFTLRSGETLGLVGESGSGKSTTGLALLRLIA-SQGEIWFDEQPLHLFDRRKML 356

Query: 353 PLGKALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERSQIPR------LLERLALSPNL 405
           P+ + +++ +QDP S++   +T+  ++ +    H  E S   R      ++  + L P  
Sbjct: 357 PIRRQIQVVFQDPNSSMNPRLTVAQIIAEGLLVHHPELSLAQREESVIAVMREVGLDPET 416

Query: 406 LSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCA 465
             R     SGG+ QR AI RA++ +P L++ DEPTS LD       L L+ +L Q+   A
Sbjct: 417 RHRYPTAFSGGQRQRIAIARAVILKPKLIILDEPTSSLDRSVQKQILTLLKKLQQDHSLA 476

Query: 466 LVLISHDKLALEKTCHRVLSL 486
            + ISHD   +   CH+++ L
Sbjct: 477 YIFISHDLQVIRSLCHQMVVL 497



 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 20/259 (7%)

Query: 23  RKNIVTALLSVQQLAISTAQETL--VESLSFELHAHQALTILGETGSGKSLLANAIIGNL 80
           R   +T  L V++  +    E    ++SLSF L + + L ++GE+GSGKS    A++  +
Sbjct: 275 RVQALTVYLPVKRSLMRRTDEPYHALKSLSFTLRSGETLGLVGESGSGKSTTGLALLRLI 334

Query: 81  PAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---V 137
                SQG+I    Q  H   + +   +  +Q+ V+ Q+P  ++NP +   + +AE   V
Sbjct: 335 A----SQGEIWFDEQPLHLFDRRKMLPI-RRQIQVVFQDPNSSMNPRLTVAQIIAEGLLV 389

Query: 138 HR----LVMGNHAASAALTDSAFQQVALHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLL 193
           H     L     +  A + +        H    +YP   SGG  QR+A   A   +  L+
Sbjct: 390 HHPELSLAQREESVIAVMREVGLDPETRH----RYPTAFSGGQRQRIAIARAVILKPKLI 445

Query: 194 IADEPTKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQ 251
           I DEPT  LD S + QI+ LL+   Q    A + I+HD++V   L   ++V+R+G + EQ
Sbjct: 446 ILDEPTSSLDRSVQKQILTLLKKLQQDHSLAYIFISHDLQVIRSLCHQMVVLRQGEVVEQ 505

Query: 252 GPAQQVLSHPQSDYTKALI 270
           G  + +   P+  YT+ L+
Sbjct: 506 GECEHIFIAPEQPYTQQLL 524