Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Enterobacter asburiae PDN3

 Score =  221 bits (564), Expect = 4e-62
 Identities = 162/495 (32%), Positives = 259/495 (52%), Gaps = 41/495 (8%)

Query: 30  LLSVQQLAIS--TAQE--TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           +LSV+ L IS  TA++   +V ++SF L   + L  +GE+GSGK+  A AIIG L    R
Sbjct: 3   VLSVENLTISYRTARQWREVVHNVSFTLGRGEMLAFVGESGSGKTTTAQAIIGLLADNAR 62

Query: 86  SQ-GKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRL---- 140
              GKI+L G+   + +    + L G +++++PQ+P ++LNP+   G QV E+ +L    
Sbjct: 63  RDAGKISLNGEEISRWSAKRLDTLRGARISLVPQDPGNSLNPVKTIGVQVGEIIQLHQKV 122

Query: 141 --VMGNHAASAALTDSAFQQVALHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
                +    A LT          Q +++YPHQLSGGM QRV    A   +  +++ADEP
Sbjct: 123 TRAQRDEQVLALLTKVGLSHP--EQRMTQYPHQLSGGMKQRVLIAIAIALRPDVIVADEP 180

Query: 199 TKGLDASRRDQIIALLQAQLTRG--ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
           T  LD + + +I+ LL         A+L +THD+ +A +    ++V R G +QEQG    
Sbjct: 181 TSALDVTVQKRILDLLDILRRESGTAVLFVTHDLALAAQRADRLLVFRDGEVQEQGNTAD 240

Query: 257 VLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTV--------DNIAMHRGEKC-LFDS 307
           ++  PQ  YT+ L++ D +    T     G PL +            ++ +G +    D 
Sbjct: 241 IVRTPQHAYTRQLLS-DLQGQRLTIAPVAGRPLASPAIRARAISKQFSLGKGHQLQALDR 299

Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGR--IHRLQAIPLGKALK------ 359
           ++F +  G    + G+SG GK+TLA +LLG  +   G+  I  + A  L +  +      
Sbjct: 300 VTFDVRRGSTHALVGESGSGKTTLARILLGFEQADSGQVIIDDIDATALSREARRQLRQK 359

Query: 360 ---LYQDPPSALAKSVTLQTLLEDVCRQHS----VERS-QIPRLLERLALSPNLLSRKAN 411
              +YQ+P ++L    TL  ++E+  +  S     ER  ++  + +R+AL   LL+R A 
Sbjct: 360 IQFVYQNPFASLDPRQTLFDIIEEPLKNFSRLGKTERKLRVETVAQRVALPVELLTRTAR 419

Query: 412 QVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISH 471
           ++SGG+ QR AI RAL+  PT+LV DE TS LD    A  L L+ +L Q++G   + I+H
Sbjct: 420 ELSGGQRQRVAIARALILEPTILVLDEATSALDVTVQAQILALLQQLQQQLGLTYLFITH 479

Query: 472 DKLALEKTCHRVLSL 486
           D   + +  H V  L
Sbjct: 480 DLSTVRRIAHSVTVL 494



 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 72/242 (29%), Positives = 125/242 (51%), Gaps = 10/242 (4%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           ++ ++F++       ++GE+GSGK+ LA  ++G   A     G++ +        ++  R
Sbjct: 297 LDRVTFDVRRGSTHALVGESGSGKTTLARILLGFEQA---DSGQVIIDDIDATALSREAR 353

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAAL-TDSAFQQVALHQD 164
             L  K +  + Q P+ +L+P     + + E  +           L  ++  Q+VAL  +
Sbjct: 354 RQLRQK-IQFVYQNPFASLDPRQTLFDIIEEPLKNFSRLGKTERKLRVETVAQRVALPVE 412

Query: 165 L-SKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRGAL 223
           L ++   +LSGG  QRVA   A   +  +L+ DE T  LD + + QI+ALLQ QL +   
Sbjct: 413 LLTRTARELSGGQRQRVAIARALILEPTILVLDEATSALDVTVQAQILALLQ-QLQQQLG 471

Query: 224 LT---ITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRYWPTT 280
           LT   ITHD+    ++  ++ V+R G + EQG    + + PQ+DYT+ LI+A P + P T
Sbjct: 472 LTYLFITHDLSTVRRIAHSVTVLRSGQVVEQGDVGTLFASPQNDYTRELIDAIPHFSPAT 531

Query: 281 PQ 282
            +
Sbjct: 532 EE 533