Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Enterobacter asburiae PDN3

 Score =  219 bits (559), Expect = 1e-61
 Identities = 164/498 (32%), Positives = 262/498 (52%), Gaps = 44/498 (8%)

Query: 30  LLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           LLS+  L+I+ + +    T+V  LS ++   + L ++GE+GSGKS+ A +I+  LP+   
Sbjct: 5   LLSIDNLSIAFSTQGETRTVVTDLSLQIQPGETLALVGESGSGKSVSALSILRLLPSPPV 64

Query: 86  S--QGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG 143
           S  QG I   G       +     + G ++A++ QEP  +LNP+    +Q+ EV  L  G
Sbjct: 65  SYPQGDILFHGSSLLHADEHTLRGIRGNKIAMIFQEPMVSLNPLHSLEKQLYEVLSLHRG 124

Query: 144 --NHAASAALTDSAFQQVALH---QDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
               AA   + D   ++  +    + L+ +PHQLSGG  QRV    A  T+  LLIADEP
Sbjct: 125 MRKEAARGEILD-CLERTGIRNAAKRLNDFPHQLSGGERQRVMIAMALLTRPELLIADEP 183

Query: 199 TKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
           T  LD + + QI+ LL+        +LL ITH++ +  KL  ++ VM+ G   EQ  A  
Sbjct: 184 TTALDVTVQAQILTLLRELRDELNMSLLFITHNLSIVRKLADSVAVMQNGRCVEQNSAST 243

Query: 257 VLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM----HRG-------EKCLF 305
           +LS PQ  YT+ L++++P   P  P +    PLL V+++++     +G       +  + 
Sbjct: 244 LLSAPQHPYTQRLLDSEPSGDPV-PLAADSTPLLRVEDLSVSFPIRKGILRRIVDQNPVL 302

Query: 306 DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQAIPLG 355
            ++ F+L  GE LG+ G+SG GKST    LL L+  SQG I          +R Q +P+ 
Sbjct: 303 KNIRFSLRPGESLGLVGESGSGKSTTGLALLRLIA-SQGEIFFDDMPLHRWNRRQMLPVR 361

Query: 356 KALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERS------QIPRLLERLALSPNLLSR 408
             +++ +QDP S+L   +++  ++E+  R H    S      ++ R++  + L      R
Sbjct: 362 PRMQVVFQDPNSSLNPRLSVLQIIEEGLRVHQPGLSAQQREQEVMRVMAEVGLDAGTRHR 421

Query: 409 KANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVL 468
              + SGG+ QR AI RAL+ +P L++ DEPTS LD    A  L L+  L ++   A + 
Sbjct: 422 YPAEFSGGQRQRIAIARALILKPELIILDEPTSSLDRTVQAQILALLKGLQEKHRLAYIF 481

Query: 469 ISHDKLALEKTCHRVLSL 486
           ISHD   +   CH+V+ L
Sbjct: 482 ISHDLQVVRALCHQVIVL 499



 Score =  103 bits (256), Expect = 2e-26
 Identities = 82/267 (30%), Positives = 134/267 (50%), Gaps = 31/267 (11%)

Query: 28  TALLSVQQLAIS-----------TAQETLVESLSFELHAHQALTILGETGSGKSLLANAI 76
           T LL V+ L++S             Q  +++++ F L   ++L ++GE+GSGKS    A+
Sbjct: 273 TPLLRVEDLSVSFPIRKGILRRIVDQNPVLKNIRFSLRPGESLGLVGESGSGKSTTGLAL 332

Query: 77  IGNLPAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNP---IMRAGEQ 133
           +  +     SQG+I  F      R    +      ++ V+ Q+P  +LNP   +++  E+
Sbjct: 333 LRLIA----SQGEI-FFDDMPLHRWNRRQMLPVRPRMQVVFQDPNSSLNPRLSVLQIIEE 387

Query: 134 VAEVHRLVMGNHAASAALTDSAFQQVALHQDLS-----KYPHQLSGGMAQRVAYLCATQT 188
              VH+        SA   +    +V     L      +YP + SGG  QR+A   A   
Sbjct: 388 GLRVHQ-----PGLSAQQREQEVMRVMAEVGLDAGTRHRYPAEFSGGQRQRIAIARALIL 442

Query: 189 QAPLLIADEPTKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKG 246
           +  L+I DEPT  LD + + QI+ALL+   +  R A + I+HD++V   L   +IV+R+G
Sbjct: 443 KPELIILDEPTSSLDRTVQAQILALLKGLQEKHRLAYIFISHDLQVVRALCHQVIVLRQG 502

Query: 247 VIQEQGPAQQVLSHPQSDYTKALINAD 273
            + EQG  Q+V S P   YT+ L++AD
Sbjct: 503 EVVEQGECQRVFSAPTQRYTRQLLSAD 529