Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Escherichia coli ECRC100

 Score =  223 bits (568), Expect = 1e-62
 Identities = 166/498 (33%), Positives = 257/498 (51%), Gaps = 44/498 (8%)

Query: 30  LLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           LL+++ L++    +    T+V  +S ++ A + L ++GE+GSGKS+ A +I+  LP+   
Sbjct: 5   LLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPV 64

Query: 86  S--QGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG 143
               G I   G+     +      + G ++A++ QEP  +LNP+    +Q+ EV  L  G
Sbjct: 65  EYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRG 124

Query: 144 -NHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPT 199
               A+     +   +V + Q    L+ YPHQLSGG  QRV    A  T+  LLIADEPT
Sbjct: 125 MRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPT 184

Query: 200 KGLDASRRDQIIALL---QAQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
             LD S + QI+ LL   Q +L  G +L ITH++ +  KL   + VM+ G   EQ  A  
Sbjct: 185 TALDVSVQAQILQLLRELQGELNMG-MLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAAT 243

Query: 257 VLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM----HRG-------EKCLF 305
           + + P   YT+ L+N++P   P  P  +    LL V+ + +     +G          + 
Sbjct: 244 LFASPTHPYTQKLLNSEPSGDPV-PLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVV 302

Query: 306 DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQAIPLG 355
            ++SFTL AGE LG+ G+SG GKST    LL L+  SQG I          +R Q +P+ 
Sbjct: 303 KNISFTLRAGETLGLVGESGSGKSTTGLALLRLIN-SQGSIIFDGQPLQNLNRRQLLPIR 361

Query: 356 KALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERS------QIPRLLERLALSPNLLSR 408
             +++ +QDP S+L   + +  ++E+  R H    S      Q+  ++  + L P    R
Sbjct: 362 HRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIDVMHEVGLDPETRHR 421

Query: 409 KANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVL 468
              + SGG+ QR AI RAL+ +P+L++ DEPTS LD    A  L L+  L Q+   A + 
Sbjct: 422 YPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLF 481

Query: 469 ISHDKLALEKTCHRVLSL 486
           ISHD   +   CH+V+ L
Sbjct: 482 ISHDLHVVRALCHQVIVL 499



 Score =  107 bits (267), Expect = 1e-27
 Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 21/259 (8%)

Query: 28  TALLSVQQLAIS-----------TAQETLVESLSFELHAHQALTILGETGSGKSLLANAI 76
           + LL V+QL ++                +V+++SF L A + L ++GE+GSGKS    A+
Sbjct: 273 STLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLAL 332

Query: 77  IGNLPAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNP---IMRAGEQ 133
           +  +     SQG I   GQ      + +   +   ++ V+ Q+P  +LNP   +++  E+
Sbjct: 333 LRLI----NSQGSIIFDGQPLQNLNRRQLLPI-RHRIQVVFQDPNSSLNPRLNVLQIIEE 387

Query: 134 VAEVHRLVMGNHAASAALTDSAFQQVALHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLL 193
              VH+  +        + D   +     +   +YP + SGG  QR+A   A   +  L+
Sbjct: 388 GLRVHQPTLSAAQREQQVIDVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLI 447

Query: 194 IADEPTKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQ 251
           I DEPT  LD + + QI+ LL++  Q  + A L I+HD+ V   L   +IV+R+G + EQ
Sbjct: 448 ILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQ 507

Query: 252 GPAQQVLSHPQSDYTKALI 270
           GP  +V + PQ +YT+ L+
Sbjct: 508 GPCARVFATPQQEYTRQLL 526