Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Escherichia coli ECOR38

 Score =  225 bits (573), Expect = 3e-63
 Identities = 168/499 (33%), Positives = 259/499 (51%), Gaps = 46/499 (9%)

Query: 30  LLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           LL+++ L++    +    T+V  +S ++ A + L ++GE+GSGKS+ A +I+  LP+   
Sbjct: 5   LLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPV 64

Query: 86  S--QGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG 143
               G I   G+     +      + G ++A++ QEP  +LNP+    +Q+ EV  L  G
Sbjct: 65  EYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRG 124

Query: 144 --NHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
               AA   + +S   +V + Q    L+ YPHQLSGG  QRV    A  T+  LLIADEP
Sbjct: 125 MRREAARGEILNS-LDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEP 183

Query: 199 TKGLDASRRDQIIALL---QAQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           T  LD S + QI+ LL   Q +L  G +L ITH++ +  KL   + VM+ G   EQ  A 
Sbjct: 184 TTALDVSVQAQILQLLRELQGELNMG-MLFITHNLSIVRKLAHRVAVMQNGRCVEQNNAA 242

Query: 256 QVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM----HRG-------EKCL 304
            + + P   YT+ L+N++P   P  P  +    LL V+ + +     +G          +
Sbjct: 243 TLFASPTHPYTQKLLNSEPSGDPV-PLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVV 301

Query: 305 FDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRI----------HRLQAIPL 354
             ++SFTL AGE LG+ G+SG GKST    LL L+  SQG I          +R Q +P+
Sbjct: 302 VKNISFTLRAGETLGLVGESGSGKSTTGLALLRLIN-SQGSIVFDGQPLQNLNRRQLLPI 360

Query: 355 GKALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERS------QIPRLLERLALSPNLLS 407
              +++ +QDP S+L   + +  ++E+  R H    S      Q+  ++  + L P    
Sbjct: 361 RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSVAQREQQVIAVMHEVGLDPETRH 420

Query: 408 RKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALV 467
           R   + SGG+ QR AI RAL+ +P+L++ DEPTS LD    A  L L+  L Q+   A +
Sbjct: 421 RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL 480

Query: 468 LISHDKLALEKTCHRVLSL 486
            ISHD   +   CH+V+ L
Sbjct: 481 FISHDLHVVRALCHQVIVL 499



 Score =  107 bits (267), Expect = 1e-27
 Identities = 79/263 (30%), Positives = 135/263 (51%), Gaps = 29/263 (11%)

Query: 28  TALLSVQQLAIS-----------TAQETLVESLSFELHAHQALTILGETGSGKSLLANAI 76
           + LL V+QL ++                +V+++SF L A + L ++GE+GSGKS    A+
Sbjct: 273 STLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLAL 332

Query: 77  IGNLPAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE 136
           +  +     SQG I   GQ      + +   +   ++ V+ Q+P  +LNP +   + + E
Sbjct: 333 LRLI----NSQGSIVFDGQPLQNLNRRQLLPI-RHRIQVVFQDPNSSLNPRLNVLQIIEE 387

Query: 137 VHRLVMGNHAASAALTDSAFQQVALHQDLS-------KYPHQLSGGMAQRVAYLCATQTQ 189
             R+    H  + ++     Q +A+  ++        +YP + SGG  QR+A   A   +
Sbjct: 388 GLRV----HQPTLSVAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILK 443

Query: 190 APLLIADEPTKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGV 247
             L+I DEPT  LD + + QI+ LL++  Q  + A L I+HD+ V   L   +IV+R+G 
Sbjct: 444 PSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGE 503

Query: 248 IQEQGPAQQVLSHPQSDYTKALI 270
           + EQGP  +V + PQ +YT+ L+
Sbjct: 504 VVEQGPCARVFAAPQQEYTRQLL 526