Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  206 bits (523), Expect = 2e-57
 Identities = 156/481 (32%), Positives = 240/481 (49%), Gaps = 47/481 (9%)

Query: 45  LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQ-GKIALFGQYQHQRTQA 103
           ++  ++  ++    + ++GE+GSGK+ L  AI+  L +  R + G+I L G         
Sbjct: 35  VLRDITLHVNRGDVVGLVGESGSGKTTLGWAIMRWLASNARERTGEIHLGGLNLRTLATD 94

Query: 104 EREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRLVMGNHA---ASAALTDSAFQ 157
           +  AL G +L ++ Q+P  +LNP +  GEQV EV   HR +    A   A   L D   +
Sbjct: 95  KLHALRGGKLGMIFQDPSASLNPTLTLGEQVTEVLRRHRRLNAREAQEYAETLLRDVDLK 154

Query: 158 QVALHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQA- 216
             AL   + +YPHQ+SGG  QR+    A   Q   LI DEPT  LD     QI+AL +  
Sbjct: 155 HPALM--MQRYPHQVSGGEKQRILIATAFACQPDCLIFDEPTTALDVISSAQILALFERL 212

Query: 217 -QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPR 275
            + T  A L I+HD+ +  ++  ++ V+ KG I EQ  A+ + S PQ  YT+ LI A P 
Sbjct: 213 REETGVAALYISHDLALVSRVTDSVCVLEKGRIVEQADARALFSTPQHAYTRRLIAAVPN 272

Query: 276 -----YWPTTPQSKTGEPLLTVDNIAMHRGEKCLFDSL--------------SFTLSAGE 316
                   TTP      PLLT+ +I +  G   L D L              S T+  GE
Sbjct: 273 PAVRLLDETTPSP---HPLLTLSDITIQYGHHRLLDKLLKRQSHQTRAANAVSLTVHEGE 329

Query: 317 ILGISGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIP---------LGKALKLYQDPPSA 367
           ILGI G+SG GKSTLA  + GL+  S     R   +P           +   ++Q P ++
Sbjct: 330 ILGIVGESGSGKSTLAKAITGLVPFSGELDFRGYTLPGRSQMDKDYRRRVQMIFQHPDAS 389

Query: 368 LAKSVTLQTLLEDVCRQHSV-----ERSQIPRLLERLALSPNLLSRKANQVSGGELQRFA 422
           L   + +  ++    R + +     E   + RLLE + L  ++ SR  +++SGG+ QR A
Sbjct: 390 LNPRMRIGDIIARPLRLYGLPNGETETQAVARLLEEVRLPASMASRYPHELSGGQKQRVA 449

Query: 423 ILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHR 482
           I RA    P L++ DE T+ LD    A+ ++L++EL +  G A + I+HD   +++  HR
Sbjct: 450 IARAFAHPPELVICDEITAALDVSVQATVIELLLELRRRYGTAYLFITHDLNLIQQVAHR 509

Query: 483 V 483
           +
Sbjct: 510 I 510



 Score =  107 bits (267), Expect = 1e-27
 Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 10/237 (4%)

Query: 42  QETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRT 101
           Q     ++S  +H  + L I+GE+GSGKS LA AI G +P      G++   G     R+
Sbjct: 314 QTRAANAVSLTVHEGEILGIVGESGSGKSTLAKAITGLVP----FSGELDFRGYTLPGRS 369

Query: 102 QAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLV-MGNHAASAALTDSAFQQVA 160
           Q +++  + +++ ++ Q P  +LNP MR G+ +A   RL  + N            ++V 
Sbjct: 370 QMDKD--YRRRVQMIFQHPDASLNPRMRIGDIIARPLRLYGLPNGETETQAVARLLEEVR 427

Query: 161 LHQDL-SKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLT 219
           L   + S+YPH+LSGG  QRVA   A      L+I DE T  LD S +  +I LL     
Sbjct: 428 LPASMASRYPHELSGGQKQRVAIARAFAHPPELVICDEITAALDVSVQATVIELLLELRR 487

Query: 220 R--GALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
           R   A L ITHD+ + +++   I VM +G + E  P   +    Q  YT AL++A P
Sbjct: 488 RYGTAYLFITHDLNLIQQVAHRIAVMYRGDVLEILPGHAMTEQAQHPYTHALLSAIP 544



 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 23/202 (11%)

Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLL----KPSQGRIH------------RLQA 351
           ++  ++ G+++G+ G+SG GK+TL   ++  L    +   G IH            +L A
Sbjct: 39  ITLHVNRGDVVGLVGESGSGKTTLGWAIMRWLASNARERTGEIHLGGLNLRTLATDKLHA 98

Query: 352 IPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHS-VERSQIPRLLERLALSPNL----- 405
           +  GK   ++QDP ++L  ++TL   + +V R+H  +   +     E L    +L     
Sbjct: 99  LRGGKLGMIFQDPSASLNPTLTLGEQVTEVLRRHRRLNAREAQEYAETLLRDVDLKHPAL 158

Query: 406 -LSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGC 464
            + R  +QVSGGE QR  I  A   +P  L+ DEPT+ LD I++A  L L   L +E G 
Sbjct: 159 MMQRYPHQVSGGEKQRILIATAFACQPDCLIFDEPTTALDVISSAQILALFERLREETGV 218

Query: 465 ALVLISHDKLALEKTCHRVLSL 486
           A + ISHD   + +    V  L
Sbjct: 219 AALYISHDLALVSRVTDSVCVL 240