Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58
Score = 221 bits (563), Expect = 5e-62
Identities = 167/518 (32%), Positives = 263/518 (50%), Gaps = 64/518 (12%)
Query: 30 LLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNL-PAGL 84
+LSV+ L S + ++V +SF++ + + + I+GE+GSGKS+ + +++ L PA
Sbjct: 6 VLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAPASS 65
Query: 85 RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGN 144
+G++ L G+ ++ E + G ++++ QEP +LNPI G Q++EV G
Sbjct: 66 HIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRHKGL 125
Query: 145 HAASA-ALTDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
A A T ++V + S+ YPHQ SGGM QRV A ++ LLIADEPT
Sbjct: 126 SKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIADEPTT 185
Query: 201 GLDASRRDQIIALLQA-QLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVL 258
LD + + QI+ L++ Q G ++L ITHD+ V ++ IVM +G E G + +
Sbjct: 186 ALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGATEDIF 245
Query: 259 SHPQSDYTKALINADP-------RYWPT---TPQSKTG----------------EPLLTV 292
Q YT+AL++A P R WPT KTG P+L+V
Sbjct: 246 RRGQHPYTRALLSAVPKLGSMHDRQWPTRFPVLDLKTGLSTEPQEVAETVACGQTPVLSV 305
Query: 293 DNI-----------AMHRGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKP 341
N+ A G +++SF L GE L + G+SGCGKST ++ L++P
Sbjct: 306 KNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLVEP 365
Query: 342 SQGRIH-------RLQAIPLGKALK----LYQDPPSALAKSVTLQTLLEDVCRQHSV--- 387
S G + RL + L K ++QDP S+L +T+ T + + +H +
Sbjct: 366 SSGDVSLDGYDVMRLDTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIKHRLGST 425
Query: 388 --ERSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDP 445
+ + LLE++ LS ++ +R ++ SGG+ QR AI RAL P ++VADE S LD
Sbjct: 426 KQAKEKTADLLEKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVADESVSALDV 485
Query: 446 ITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
A L+++L Q + A + ISHD +E+ HRV
Sbjct: 486 SIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRV 523
Score = 112 bits (279), Expect = 5e-29
Identities = 86/258 (33%), Positives = 129/258 (50%), Gaps = 13/258 (5%)
Query: 24 KNIVTALLSVQQL-AISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPA 82
KN+VT L A T VE++SF+L + L+++GE+G GKS +I+ +
Sbjct: 306 KNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLVEP 365
Query: 83 GLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HR 139
S G ++L G Y R K + ++ Q+P+ +LNP M G ++E HR
Sbjct: 366 ---SSGDVSLDG-YDVMRLDTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIKHR 421
Query: 140 LVMGNHAASAALTDSAFQQVALHQDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
L G+ + T ++V L D++ +YPH+ SGG QR+A A +++ADE
Sbjct: 422 L--GSTKQAKEKTADLLEKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVADES 479
Query: 199 TKGLDASRRDQIIALLQ--AQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
LD S + Q+ LL Q A L I+HD+ V E++ + VM G I E GP
Sbjct: 480 VSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAA 539
Query: 257 VLSHPQSDYTKALINADP 274
V +PQ YTK L+ A P
Sbjct: 540 VFDNPQHPYTKKLMAAVP 557
Score = 85.5 bits (210), Expect = 5e-21
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 29/226 (12%)
Query: 287 EPLLTVDNIA---MHRGE-KCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS 342
+P+L+V N+ + GE K + +SF + +GE + I G+SG GKS + L+ LL P+
Sbjct: 4 KPVLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAPA 63
Query: 343 QGRIH----------------RLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHS 386
I ++ + ++Q+P ++L T+ + +V +H
Sbjct: 64 SSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRHK 123
Query: 387 -----VERSQIPRLLERLALSPNLLSR---KANQVSGGELQRFAILRALLTRPTLLVADE 438
R++ RLLE++ + PN SR +Q SGG QR I AL +RP LL+ADE
Sbjct: 124 GLSKQEARAETVRLLEKVRI-PNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIADE 182
Query: 439 PTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
PT+ LD L LI L +E G +++ I+HD + + R +
Sbjct: 183 PTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTI 228