Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58
Score = 218 bits (555), Expect = 5e-61
Identities = 161/523 (30%), Positives = 269/523 (51%), Gaps = 68/523 (13%)
Query: 27 VTALLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPA 82
V+ +LSVQ L S + ++V ++SF++ + + I+GE+GSGKS+ + +I+ L
Sbjct: 15 VSPVLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLLDR 74
Query: 83 GL-RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VH 138
R +GK+ L G+ + E + GK ++++ QEP +LNPI G+Q+AE VH
Sbjct: 75 KTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEALTVH 134
Query: 139 RLVMGNHAASAALTDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIA 195
+ + + A + + ++V + S+ YPHQ SGGM QRV A ++ LLIA
Sbjct: 135 QDISSSAAKAEVIR--LLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLIA 192
Query: 196 DEPTKGLDASRRDQIIALL-QAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGP 253
DEPT LD + + QI+ L+ Q Q G ++L ITHD+ V ++ IVM +G + E G
Sbjct: 193 DEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETGT 252
Query: 254 AQQVLSHPQSDYTKALINADPRYWPTTPQ----------SKTGE---------------- 287
+ Q YT+AL++A P+ + KTGE
Sbjct: 253 TDDIFHRGQHPYTRALLSAVPKLGSMRSRLLPARFPIIDIKTGESPPVVETKDTVSGGKT 312
Query: 288 PLLTVDNIAMH-----------RGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLL 336
P+L+V ++ G + +SF L+ GE L + G+SGCGKST +
Sbjct: 313 PILSVKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSIT 372
Query: 337 GLLKPSQG----------RIHRLQAIPLGKALKL-YQDPPSALAKSVTLQTLLEDVCRQH 385
L++P+ G ++ R + +++++ +QDP ++L +++ T + + +H
Sbjct: 373 RLIEPTSGNVTLDGYEVLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEH 432
Query: 386 SV-----ERSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPT 440
+ R + LLE++ LSP+++ R ++ SGG+ QR AI R+L+ P ++VADE
Sbjct: 433 RLGQKAQAREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAV 492
Query: 441 SRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
S LD A L+++L Q + A + ISHD +E+ HRV
Sbjct: 493 SALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRV 535
Score = 103 bits (256), Expect = 2e-26
Identities = 74/235 (31%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 46 VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
VE +SF+L + L+++GE+G GKS +I + + G + L G Y+ +
Sbjct: 341 VEKVSFDLAEGETLSLVGESGCGKSTTGRSITRLIEP---TSGNVTLDG-YEVLKLDRTT 396
Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRLVMGNHAASAALTDSAFQQVALH 162
+ + ++ Q+P+ +L+P M G + E HRL G A + ++V L
Sbjct: 397 LRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEHRL--GQKAQAREKAADLLEKVGLS 454
Query: 163 QDLSK-YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQ--AQLT 219
D+ K +PH+ SGG QR+A + +++ADE LD S + Q+ LL Q
Sbjct: 455 PDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAVSALDVSIKAQVCNLLLDLQQSL 514
Query: 220 RGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
A L I+HD+ V E++ + VM G I E GP V +PQ YTK L++A P
Sbjct: 515 NLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNPQHPYTKKLMSAVP 569
Score = 83.6 bits (205), Expect = 2e-20
Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 32/236 (13%)
Query: 280 TPQSKTG---EPLLTVDNIA----MHRGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLA 332
T +TG P+L+V N+ + G K + ++SF ++ E + I G+SG GKS +
Sbjct: 6 TSMEQTGGSVSPVLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTS 65
Query: 333 DLLLGLLKPSQGRIHR--------LQAIPLGKALK--------LYQDPPSALAKSVTLQT 376
++ LL RI L A+P + K ++Q+P ++L +
Sbjct: 66 LSIMRLLDRKTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGK 125
Query: 377 LLEDVCRQH-----SVERSQIPRLLERLALSPNLLSRKAN---QVSGGELQRFAILRALL 428
+ + H S ++++ RLLE++ + PN SR + Q SGG QR I AL
Sbjct: 126 QIAEALTVHQDISSSAAKAEVIRLLEKVRI-PNAASRFGDYPHQFSGGMRQRVMIAMALA 184
Query: 429 TRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
++P LL+ADEPT+ LD L LI +L +E G +++ I+HD + + R +
Sbjct: 185 SKPKLLIADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTI 240