Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  212 bits (540), Expect = 2e-59
 Identities = 155/490 (31%), Positives = 244/490 (49%), Gaps = 39/490 (7%)

Query: 30  LLSVQQLAISTAQE--TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQ 87
           LL+V+ L++  A     +V+ +SF++   +   I+GE+GSGK+L   A+I  LP  +   
Sbjct: 6   LLTVRGLSLEVAGSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIAVT 65

Query: 88  GKIALF-GQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMG 143
           G   ++ GQ        E   L G ++ V+ QEP  +LNP M  G Q+ E   +H  +  
Sbjct: 66  GGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKLSP 125

Query: 144 NHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
                  L     ++V +      L+ YPH+ SGGM QR+        +  LLIADEPT 
Sbjct: 126 EERREKIL--EMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183

Query: 201 GLDASRRDQIIALLQAQLTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQV 257
            LDA  +  ++ L+  +LTR    A+L I+HD+ +  +    I+VM KG I EQG  + +
Sbjct: 184 ALDAVIQRDVMELM-VELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTEDL 242

Query: 258 LSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM-HRGEKCLFDS--------- 307
           L  P+  YTK L+++ P          +  P+++   I + + G K L            
Sbjct: 243 LDAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKAKPKRALHG 302

Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIPLGK--------ALK 359
           +S  +  GE++ + G SG GK+TL   + GL+K S+G I R Q     +           
Sbjct: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHI-RFQGRERNEDWNDYRLNCQM 361

Query: 360 LYQDPPSALAKSVTLQTLLEDVCR-----QHSVERSQIPRLLERLALSPNLLSRKANQVS 414
           ++QDP S+L   +T+Q L+E+  R       + +R +    LE + L  +   R  +++S
Sbjct: 362 VFQDPYSSLDPRMTIQALVEEALRLVPGLDQAAKRKRALETLEEVGLGVDYAGRYPHELS 421

Query: 415 GGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKL 474
           GG+ QR AI RA+  RP  L+ADEP S LD    A  L L  +L +  G + + ISHD  
Sbjct: 422 GGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLG 481

Query: 475 ALEKTCHRVL 484
            +E+   RV+
Sbjct: 482 VVEQVADRVV 491



 Score =  105 bits (263), Expect = 3e-27
 Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 18/258 (6%)

Query: 24  KNIVTALLSVQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAG 83
           + IV      + L      +  +  +S ++H  + + ++G +GSGK+ L   I G +   
Sbjct: 278 RGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVK-- 335

Query: 84  LRSQGKIALFGQYQHQRTQAEREALWGK---QLAVLPQEPWHALNPIMRAGEQVAEVHRL 140
             S+G I   G+        ER   W        ++ Q+P+ +L+P M     V E  RL
Sbjct: 336 -ESEGHIRFQGR--------ERNEDWNDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRL 386

Query: 141 VMG-NHAASAALTDSAFQQVALHQDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
           V G + AA         ++V L  D + +YPH+LSGG  QRVA   A   +   LIADEP
Sbjct: 387 VPGLDQAAKRKRALETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEP 446

Query: 199 TKGLDASRRDQIIALLQAQLTRGAL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
              LD + R Q++ L      R     L I+HD+ V E++   ++VM+ G I E+G    
Sbjct: 447 VSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDT 506

Query: 257 VLSHPQSDYTKALINADP 274
           +   P+  YT+ L++A P
Sbjct: 507 IFDSPREAYTRRLLSAIP 524