Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  200 bits (508), Expect = 1e-55
 Identities = 151/521 (28%), Positives = 258/521 (49%), Gaps = 68/521 (13%)

Query: 29  ALLSVQQLAIST----AQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPA-G 83
           A+LSV+ L  S       + +V  +SF++   + + I+GE+GSGKS+ + +I+  L    
Sbjct: 14  AVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRES 73

Query: 84  LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRL 140
            R QG+I L G+     ++     + G ++A++ QEP  +LNP+   G+Q++E    H+ 
Sbjct: 74  SRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQP 133

Query: 141 VMGNHAASAALTDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPLLIADE 197
           +  + A + A T    ++V +    S+   YPH+ SGGM QRV    A  ++  LLIADE
Sbjct: 134 M--SKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADE 191

Query: 198 PTKGLDASRRDQIIALLQA-QLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           PT  LD + + QI+ L++  Q   G ++L ITHD+ V  ++    +VM +G   E G   
Sbjct: 192 PTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATA 251

Query: 256 QVLSHPQSDYTKALINADP--------------------------RYWPTTPQSKTGEPL 289
            +    +  YT+AL++A P                             P      + +P+
Sbjct: 252 DIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTVDASAQPV 311

Query: 290 LTVDNIAMH-----------RGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGL 338
           L V+ +               G     +++SF L AGE L + G+SGCGKST    ++ L
Sbjct: 312 LKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRL 371

Query: 339 LKPSQGR--IHRLQAIPLGKA---------LKLYQDPPSALAKSVTLQTLLEDVCRQHSV 387
           ++P  G   ++    + L K+           ++QDP ++L   +T+   + +   +H +
Sbjct: 372 IEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPFLEHRM 431

Query: 388 -----ERSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSR 442
                 +  +  +L ++ LSP++ +R  ++ SGG+ QR  I RAL  +P ++VADE  S 
Sbjct: 432 GSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSA 491

Query: 443 LDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
           LD    A  + L+++L Q +  A + ISHD   +E+  HRV
Sbjct: 492 LDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRV 532



 Score =  112 bits (279), Expect = 5e-29
 Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 14/248 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           VE++SF+L A + L+++GE+G GKS    AI+  +       G + + G+      ++  
Sbjct: 338 VENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLIEP---DAGSVVVNGENILTLDKSGM 394

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRLVMGNHAASAALTDSAFQQVALH 162
             +  K + ++ Q+P+ +LNP M  G  +AE    HR  MG+   +  +      +V L 
Sbjct: 395 REM-RKTVQMIFQDPFASLNPRMTVGAAIAEPFLEHR--MGSAREAKEVVADMLNKVGLS 451

Query: 163 QDLS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL---LQAQL 218
            D++ +YPH+ SGG  QR+    A   Q  +++ADE    LD S + Q+I L   LQ  L
Sbjct: 452 PDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVSIKAQVINLMLDLQQSL 511

Query: 219 TRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRYWP 278
              A L I+HD+ V E++   + VM  G I E GP   V  +PQ DYT+ L+ A P   P
Sbjct: 512 DL-AFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDNPQHDYTRKLMAAVPVPDP 570

Query: 279 TTPQSKTG 286
               ++ G
Sbjct: 571 DRRNTRRG 578