Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  211 bits (536), Expect = 7e-59
 Identities = 163/493 (33%), Positives = 250/493 (50%), Gaps = 39/493 (7%)

Query: 30  LLSVQQLAISTAQ----ETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNL-PAGL 84
           +LSV+ L +   +       V+ +SF+LHA + L I+GE+GSGKS+ A+ I+G L P   
Sbjct: 11  VLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPVIT 70

Query: 85  RSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLV-MG 143
            S G+I   G       + +   L G+ ++++ Q+P  ALNP+M  G+QVAEV     +G
Sbjct: 71  VSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHGVG 130

Query: 144 NHAASAALTDSAFQQVALHQDLS---KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
                 A      ++V L   L    +YP +LSGG  QRV    A      +LIADEPT 
Sbjct: 131 TRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEPTT 190

Query: 201 GLDASRRDQIIALLQAQLTRG--ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVL 258
            LD + + QI+ L++    R   +++ ITHD  V  ++   ++VM KG + EQG A QVL
Sbjct: 191 ALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQVL 250

Query: 259 SHPQSDYTKALINADPRYWPTTPQSKTGEPL-LTVDNIAM-HRGEKCLF---------DS 307
            +P   YT+ L+ A PR            P+ L V+N+   +R     F         ++
Sbjct: 251 INPVHPYTQRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFFRKARTVKAVNN 310

Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIPLG-------KALK- 359
           +SF L  G+ LG+ G+SG GKS+L  +LL LL P  G I R     +        +AL+ 
Sbjct: 311 VSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDGGAI-RFDGRDIATMDESAFRALRP 369

Query: 360 ----LYQDPPSALAKSVTLQTLLEDVCRQHSVE----RSQIPRLLERLALSPNLLSRKAN 411
               ++QDP ++L    T+  +L      H +     R++   +L+ + L      R  +
Sbjct: 370 YIQMIFQDPFASLNPRHTIGKILTVGPLAHGMALHEARTKALGILKLVGLDEQAYDRFPH 429

Query: 412 QVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISH 471
           + SGG+ QR  I RAL+  P +LVADE  S LD    A  L+L+  + +E+  A++ I+H
Sbjct: 430 EFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVAMIFITH 489

Query: 472 DKLALEKTCHRVL 484
           D     + C  VL
Sbjct: 490 DLRVASQICDDVL 502



 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 23/240 (9%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNL-PAGLRSQGKIALFGQYQHQRTQAE 104
           V ++SF+L   Q L ++GE+GSGKS L   ++  L P G    G I   G+      ++ 
Sbjct: 308 VNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDG----GAIRFDGRDIATMDESA 363

Query: 105 REALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVAL--- 161
             AL    + ++ Q+P+ +LNP    G+       L +G  A   AL ++  + + +   
Sbjct: 364 FRAL-RPYIQMIFQDPFASLNPRHTIGKI------LTVGPLAHGMALHEARTKALGILKL 416

Query: 162 ----HQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQ 217
                Q   ++PH+ SGG  QR+    A      +L+ADE    LD S + Q++ LL A+
Sbjct: 417 VGLDEQAYDRFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELL-AR 475

Query: 218 LTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
           + R    A++ ITHD+ VA ++   ++VM KG + EQGP  ++   P   YT+ L+ A P
Sbjct: 476 VQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLVAAIP 535