Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 548 a.a., dipeptide ABC transporter ATPase from Agrobacterium fabrum C58
Score = 237 bits (604), Expect = 9e-67
Identities = 153/483 (31%), Positives = 265/483 (54%), Gaps = 29/483 (6%)
Query: 30 LLSVQQLAISTAQ----ETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
LL V+ L ++ + ++ +++F + A + + ++GETGSGKS+ A IIG LP
Sbjct: 5 LLKVENLNVTFSNYGRTRQVLRNVAFTVAAGERVALIGETGSGKSVTAKTIIGTLPKNAA 64
Query: 86 -SQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGN 144
+ G I + G+ + EREAL G +++ Q+P + NP+ + G + +V R
Sbjct: 65 ITSGAIIIDGRDVLALPRREREALKGTAFSLIMQDPLSSFNPVFKIGTHLDDVMRFADKR 124
Query: 145 HAASAALTD------SAFQQVAL---HQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIA 195
+++ + + ++V L + ++ YP +LSGGM QRV A Q LLIA
Sbjct: 125 DGINSSKAERRNRIAAVLRRVQLADTERVMNAYPSELSGGMRQRVLIGLALLHQPKLLIA 184
Query: 196 DEPTKGLDASRRDQIIALLQAQLTRG--ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGP 253
DEP LD + +D+I+ L+ + ALL ITH++ V K+ ++VM G I E GP
Sbjct: 185 DEPGTALDVTTQDEILNLINQLVAEENMALLMITHNLGVVRKVADRVVVMHHGDIVETGP 244
Query: 254 AQQVLSHPQSDYTKALINADPRYWP---TTPQSKTGEPLLTVDNIAMHRGEKCLFDSL-- 308
Q+L P +DYT++L++A P + T T +P++T++ + G + + ++
Sbjct: 245 CTQILHSPAADYTRSLLDAVPPLYGSRVTDLAQSTRQPIITIEGLNKIYGRRNGYHAVRD 304
Query: 309 -SFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIP-LGKALK--LYQDP 364
+ TL GE+ G++G+SG GK+++A +++GL +P+ G + +P GK L +YQ+P
Sbjct: 305 VNITLKEGEVFGLAGESGSGKTSVARMIMGLSRPTSGNLVIDAPVPERGKRLTQIVYQNP 364
Query: 365 PSAL-AKSVTLQTL---LEDVCRQHSVERSQIPRLLERLALSPNLLSRKANQVSGGELQR 420
++L K QTL L+ + V S++ L+E + L + L + +++SGG+ QR
Sbjct: 365 GTSLNPKRTVRQTLALPLKSIGMDGQVRESRMQELMELVRLPQSYLGKYPHELSGGQKQR 424
Query: 421 FAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTC 480
AI RAL P +L+ DEPT+ LD + + L+++L +E+G ++ISHD + C
Sbjct: 425 VAIARALAAEPKILILDEPTAALDVSVQKTVIDLLLQLRKELGLTYLMISHDLSLMRNFC 484
Query: 481 HRV 483
R+
Sbjct: 485 SRI 487
Score = 89.7 bits (221), Expect = 2e-22
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 19/234 (8%)
Query: 46 VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
V ++ L + + GE+GSGK+ +A I+G + G + + +
Sbjct: 302 VRDVNITLKEGEVFGLAGESGSGKTSVARMIMG---LSRPTSGNLVIDAPVPER------ 352
Query: 106 EALWGKQLA-VLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVALHQD 164
GK+L ++ Q P +LNP + +A + + + + + V L Q
Sbjct: 353 ----GKRLTQIVYQNPGTSLNPKRTVRQTLALPLKSIGMDGQVRESRMQELMELVRLPQS 408
Query: 165 -LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRGAL 223
L KYPH+LSGG QRVA A + +LI DEPT LD S + +I LL QL +
Sbjct: 409 YLGKYPHELSGGQKQRVAIARALAAEPKILILDEPTAALDVSVQKTVIDLL-LQLRKELG 467
Query: 224 LT---ITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
LT I+HD+ + I +M +G I E+G V + P YT+ALI A P
Sbjct: 468 LTYLMISHDLSLMRNFCSRIAIMLRGEIVEEGVTSAVFAEPSHPYTRALIAAIP 521
Score = 82.4 bits (202), Expect = 4e-20
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 32/230 (13%)
Query: 287 EPLLTVDNIAM----HRGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS 342
EPLL V+N+ + + + + +++FT++AGE + + G++G GKS A ++G L +
Sbjct: 3 EPLLKVENLNVTFSNYGRTRQVLRNVAFTVAAGERVALIGETGSGKSVTAKTIIGTLPKN 62
Query: 343 ----QGRI----HRLQAIPLGK--ALK------LYQDPPSALAKSVTLQTLLEDVCR--- 383
G I + A+P + ALK + QDP S+ + T L+DV R
Sbjct: 63 AAITSGAIIIDGRDVLALPRREREALKGTAFSLIMQDPLSSFNPVFKIGTHLDDVMRFAD 122
Query: 384 -------QHSVERSQIPRLLERLALSPN--LLSRKANQVSGGELQRFAILRALLTRPTLL 434
+ R++I +L R+ L+ +++ +++SGG QR I ALL +P LL
Sbjct: 123 KRDGINSSKAERRNRIAAVLRRVQLADTERVMNAYPSELSGGMRQRVLIGLALLHQPKLL 182
Query: 435 VADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
+ADEP + LD T L LI +L E AL++I+H+ + K RV+
Sbjct: 183 IADEPGTALDVTTQDEILNLINQLVAEENMALLMITHNLGVVRKVADRVV 232