Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score =  132 bits (332), Expect = 8e-36
 Identities = 85/246 (34%), Positives = 128/246 (52%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           +G  LL++L+ L L+  +    DP K DL     APS    LGTD +GR  F+RL     
Sbjct: 24  IGGGLLVVLIALALMGLVWSPFDPLKIDLMSRFQAPSAAHWLGTDEFGRDVFSRLLIGAR 83

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
           TSL +++  VS + L G + G++A + RGW DR      + LLA PG+++ L   A++  
Sbjct: 84  TSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALLAFPGILMALGIMAIIGA 143

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
           S + + LA+ +       RVVR   LSL E   IEASR+ G +  Y   RH+ P     L
Sbjct: 144 SKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNSELYTMLRHIAPNCLAPL 203

Query: 198 FTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFIL 257
             LA    G A+L+ +++ FL +G+ PP A  G M+     Y   A W+   P L + + 
Sbjct: 204 CVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYIASAPWLGVFPGLFICLT 263

Query: 258 VLSFQM 263
           +L+  +
Sbjct: 264 LLAINL 269