Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., nickel ABC transporter permease from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 6e-32
 Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 6/252 (2%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G+ +L+  ++L L    +   DP  Q+ + +L  PS   P GTD+YGR   +R+      
Sbjct: 28  GLLILLAWLVLALFAPWIAPYDPIAQNTDFSLLGPSLAHPFGTDNYGRDILSRVIWGARI 87

Query: 79  SLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGS 138
            L +A+  V    ++G   G V+ +  G +D     +++++LA P L+L+L   A++   
Sbjct: 88  DLQLAIVGVIFPFMIGTFIGAVSGYIGGRFDSVCMRVIDVILAFPFLVLMLAIMAILGPG 147

Query: 139 FFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLF 198
               Y+A+AL+ WV + R++RS+ L L E     A++  GF    +  RHL P     +F
Sbjct: 148 LKSFYIAMALVGWVSYARLIRSQILVLKESDFALAAKSLGFGHGRILFRHLLPNA---MF 204

Query: 199 TLACFGAGNAILAL---ASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVF 255
               F   +A+L L   A++ +L +G++PP AE G M+ E   +   A W+   P L + 
Sbjct: 205 GSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQAFITTAWWICTFPGLAIV 264

Query: 256 ILVLSFQMLAKG 267
            L + F +LA G
Sbjct: 265 TLAMGFSLLADG 276