Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 3e-32
 Identities = 74/225 (32%), Positives = 119/225 (52%)

Query: 40  DPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIATSLTMAVACVSSSALLGLVTGV 99
           DP      + LAAP     LGTD +GR   +RL +A ATS  ++V  V+++ LLG + GV
Sbjct: 32  DPVTLGYAKRLAAPDAVHWLGTDEFGRDVLSRLMTAAATSARISVLTVATAVLLGTLVGV 91

Query: 100 VAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGSFFILYLAIALMLWVEFFRVVR 159
           ++ + RGW DR      + LLA PG++L L F A+   + + + +A+ +       R+VR
Sbjct: 92  LSGYLRGWTDRVLMAFNDALLAFPGILLALGFLAVAGANEYGIVVALGIAYAPSVARIVR 151

Query: 160 SKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLFTLACFGAGNAILALASIGFLY 219
              +SL E   I ASRL G + +++  RH+ P     L  LA    G A+LA +++ FL 
Sbjct: 152 GTVMSLREMDYIAASRLMGNSEFFIVWRHVLPNCVAPLVVLATSMFGWALLAESALSFLG 211

Query: 220 VGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFILVLSFQML 264
           +G+ PP    G M+     +  +A+W+   P   + + +L   +L
Sbjct: 212 LGVPPPAPTWGNMLAGSRPFIAKAVWLAIFPGACISLTLLGINLL 256