Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 5e-35
 Identities = 78/255 (30%), Positives = 130/255 (50%)

Query: 10  LHLSKPQWLGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNF 69
           L  ++  W+G+ LL+++V++ L   L+   DP +Q++   L  PS    LGTD YGR   
Sbjct: 19  LFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVL 78

Query: 70  ARLSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVL 129
           +RL      SL +    V  + ++G   GV+A +  G  DR  +  +++LL+ P L+L L
Sbjct: 79  SRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGL 138

Query: 130 LFGAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHL 189
           +  AM+  S   L +AIA+     F R+ R+ T++L ++  +EA R  G+    L   H+
Sbjct: 139 MVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHI 198

Query: 190 WPELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQ 249
            P +  ++  L       AI   AS+ F+ +G+ PP    G M+ E F     A W+   
Sbjct: 199 LPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVF 258

Query: 250 PILVVFILVLSFQML 264
           P L + + VL+  +L
Sbjct: 259 PSLAILLTVLALSLL 273