Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  119 bits (298), Expect = 8e-32
 Identities = 73/256 (28%), Positives = 132/256 (51%), Gaps = 6/256 (2%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEP------LGTDHYGRSNFAR 71
           +G+  +++++++ +  + L   +PA Q  +  LA P+W +       LGTD  GR   +R
Sbjct: 34  VGLVYVVIMILIAVFANFLAPYNPADQFRDALLAPPAWQDGGSLTHLLGTDDVGRDVLSR 93

Query: 72  LSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLF 131
           L      SL +    V  S ++G+V G+VA +  G  D     +++++LA+P L+L L+ 
Sbjct: 94  LMYGARLSLLVGCLVVVLSLIMGVVLGLVAGYFGGIVDNIIMRIVDIMLALPSLLLALVL 153

Query: 132 GAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWP 191
            A+   S     LA+  +    + R+ R+  L  + +  + ASR+ G  A      +++P
Sbjct: 154 VAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFVNIFP 213

Query: 192 ELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPI 251
                L   A  G  NAIL +A++GFL +G +PP  E G M+ ++ ++   A WV+  P 
Sbjct: 214 NCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPG 273

Query: 252 LVVFILVLSFQMLAKG 267
           L + + VL+F ++  G
Sbjct: 274 LAILLTVLAFNLMGDG 289