Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  111 bits (277), Expect = 2e-29
 Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 1/261 (0%)

Query: 4   QRPNMKLHLSKPQWLGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDH 63
           Q+   +L  ++P    + +L + V+  L   L    DP +  L      P      GTD 
Sbjct: 6   QQVRHQLRRNRPAQFSLFVLFIFVVAALCAGLS-PYDPDRMSLGARTLPPDAAHWFGTDE 64

Query: 64  YGRSNFARLSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMP 123
           YGR  F R       SL +    +  S L+G V G V+ +  GW D      +++L+A+P
Sbjct: 65  YGRDYFTRALYGGQISLMVGFLAMLFSTLIGTVVGTVSGYFGGWLDNLMMRAVDILMAIP 124

Query: 124 GLILVLLFGAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWY 183
              L+L+  A +      + L I+L+ W+   R+VR++TLS+ E+  +  +R  G +   
Sbjct: 125 AFFLLLVVNAYLKPGVDNIILIISLLTWMNMSRLVRAETLSVKEREYVLYARASGEHPLR 184

Query: 184 LFRRHLWPELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQA 243
           +  RH+ P +   +   A     +AIL  +++ FL +G++ P A  G M+     Y  +A
Sbjct: 185 IIARHIIPGVLPTIIVAATLNIASAILMESTLSFLGLGVQAPAASWGSMLNNAQSYIGEA 244

Query: 244 LWVLAQPILVVFILVLSFQML 264
            W+   P +++ + V SF +L
Sbjct: 245 SWLAMFPGILILLTVFSFNVL 265