Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  111 bits (277), Expect = 2e-29
 Identities = 74/259 (28%), Positives = 114/259 (44%)

Query: 9   KLHLSKPQWLGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSN 68
           +L  S   + G++ + LLV + L    L   DP  QD    L AP+    LGTD YGR  
Sbjct: 9   RLRRSPAAFCGLAAIALLVAIALFAPWLAPLDPNWQDAAARLQAPNGQHWLGTDSYGRDL 68

Query: 69  FARLSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILV 128
            +RL      +L +       +   GL+ G+++ +  GW +R      +++++MP LIL 
Sbjct: 69  LSRLIYGTRPALGLVALVTVITLPAGLLVGILSGYYGGWMERILMRFTDVVMSMPRLILA 128

Query: 129 LLFGAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRH 188
             F AM+        LA+AL  W  + R  RS+   L     + A+ + G     L   H
Sbjct: 129 FAFVAMLGPGLVNGALALALTTWPAYARQARSEIQRLRHSDYLAAAEMMGIRGLRLLVGH 188

Query: 189 LWPELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLA 248
           + P                 ILA A +GFL +G +PP AE G M+ +  +      W+ A
Sbjct: 189 ILPLCLPSAIVRLALDLAGIILAAAGLGFLGLGARPPMAEWGAMIADGMQVIFDQWWIAA 248

Query: 249 QPILVVFILVLSFQMLAKG 267
            P   +    L+F +L  G
Sbjct: 249 VPGGAILFASLAFNLLGDG 267