Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  108 bits (270), Expect = 1e-28
 Identities = 74/249 (29%), Positives = 118/249 (47%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G+ +L+L+ + V+   +         D +R    PS     G D  GR  F+R+      
Sbjct: 44  GLFVLLLIAVAVIAPWVAPFDAENYFDYDRLNDGPSMLHWFGVDSLGRDIFSRVLVGAQI 103

Query: 79  SLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGS 138
           SL   V  V   A +G V G+VA +  GWWDR    + ++L A PG++L +   A++   
Sbjct: 104 SLAAGVFAVLIGAAIGTVLGLVAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAIMGSG 163

Query: 139 FFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLF 198
              + +A+A+     F R+VR  TL L +Q  IE++R  G +   +   H+ P     + 
Sbjct: 164 MANVIIAVAVFSIPAFARLVRGNTLVLKQQTFIESARSMGASDATILFSHILPGTVSSIV 223

Query: 199 TLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFILV 258
                  G +I++ AS+ FL +G +PP  E G M+ E       A  V   P L +F+ V
Sbjct: 224 VYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAIFPSLAIFLTV 283

Query: 259 LSFQMLAKG 267
           L+F +L  G
Sbjct: 284 LAFNLLGDG 292