Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  111 bits (277), Expect = 2e-29
 Identities = 70/250 (28%), Positives = 122/250 (48%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           +G  ++I ++ L++    +   DP   DL   L APS     GTD  GR  F+R+ +   
Sbjct: 35  VGGVIMIAMLFLMVASPWIVPHDPNALDLTARLQAPSAQHWFGTDEVGRDLFSRVLTGSQ 94

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
            S+T  +A V  +  +G + G ++    G  D     +++++L++P L+L +   A +  
Sbjct: 95  QSITAGLAVVVIAGGIGSLLGCLSGVLGGRGDAIIMRVMDIMLSIPSLVLTMALAAALGP 154

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
           S F   LAIA++    + R+ R +TL + +   ++A+R +G + W+L R H+       L
Sbjct: 155 SLFNAMLAIAIVRIPFYVRLARGQTLVVRQFTYVQAARTFGASRWHLIRWHILRNALPPL 214

Query: 198 FTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFIL 257
              A    G+AIL  A++GF+ +G + P AE G M+     Y     W  A P   + I 
Sbjct: 215 IVQASLDIGSAILMAATLGFIGLGAQQPTAEWGAMVAVGRNYVLDQWWYCAFPGAAILIT 274

Query: 258 VLSFQMLAKG 267
            + F +   G
Sbjct: 275 AVGFNLFGDG 284