Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., nickel ABC transporter permease subunit NikC from Escherichia coli ECRC62

 Score =  106 bits (264), Expect = 6e-28
 Identities = 77/247 (31%), Positives = 119/247 (48%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           L + ++ LL ++ L        DP   DL   L +P     LGTDH GR  F+RL +A  
Sbjct: 13  LALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATR 72

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
            SL   +AC+     LGLV G  A    G  D+    + +M +  P  IL      ++  
Sbjct: 73  VSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGT 132

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
               + +AIAL  W  + R+VRS  +SL ++  + ASRL G     +F  HL   +   L
Sbjct: 133 GLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSL 192

Query: 198 FTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFIL 257
             LA    G+ +L +A + FL +G+  P AE G+M+ +  +Y       +  P L +FI 
Sbjct: 193 LVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFIS 252

Query: 258 VLSFQML 264
           V++F ++
Sbjct: 253 VMAFNLV 259