Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  110 bits (274), Expect = 5e-29
 Identities = 68/245 (27%), Positives = 114/245 (46%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G ++L +LV++ +   L+   DPA Q L  AL  PSW    GTD +GR  F+RL      
Sbjct: 39  GFAILAILVLVAVFAPLIAPFDPASQVLENALQPPSWAHLAGTDEFGRDIFSRLVYGTRI 98

Query: 79  SLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGS 138
           ++   ++       +GL  GV+A +  G  D       +++L+ P L+L L F A +   
Sbjct: 99  TIQTVLSVSIIVGPIGLAIGVMAGFFGGRTDAILMRATDIVLSFPSLVLALAFAAAMGAG 158

Query: 139 FFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLF 198
                +AI+L  W    R+ R++ L +     + A+RLYG +   +   ++ P     + 
Sbjct: 159 LGTAIIAISLTAWPPIARLARAEALVVRNTDYVAAARLYGASPLRILFLYIAPMCIPSVI 218

Query: 199 TLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFILV 258
                     IL  AS+GFL +G +PP  E G M+    ++     WV   P + + +  
Sbjct: 219 VRLTLNMAGIILTAASLGFLGLGAQPPLPEWGAMISSGRKFMLDYWWVAVMPGIAILLTS 278

Query: 259 LSFQM 263
           L+F +
Sbjct: 279 LAFNI 283