Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  124 bits (310), Expect = 3e-33
 Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAP--SWGEPLGTDHYGRSNFARLSSA 75
           LG  L  ++ + V+   +L+ G   K DL   LA P  +   PLGTD  GR   AR+ + 
Sbjct: 18  LGAFLTTVICLAVVFSDVLFPGGADKIDLMARLAKPFANAAHPLGTDPLGRDVLARVVAG 77

Query: 76  IATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMV 135
              SL +    V  + + G+  G+VA + RG+WD       ++ LAMP ++L + F A+V
Sbjct: 78  GKISLLVGFTSVIGAVIFGVAVGLVAGYYRGFWDMLVMRFADIQLAMPFILLAITFIAIV 137

Query: 136 PGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELRE 195
            GS     + + +  WV++ R+VR   L+L E+  I ++R  G   W +  +HL P L  
Sbjct: 138 GGSLTNTIILLIISQWVQYARLVRGSVLTLREREFILSARAIGVKDWRIILQHLLPNLIG 197

Query: 196 DLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVF 255
            +  L      N IL  +S+ FL +G+ P     G M+ +   Y   A WV   P L + 
Sbjct: 198 PVIVLMTLNVANNILLESSLTFLGLGVDPTIPSWGGMLADGRTYLQTAWWVSVFPGLAIL 257

Query: 256 ILVLSFQML 264
           + VL   +L
Sbjct: 258 LTVLGLNLL 266