Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  107 bits (268), Expect = 2e-28
 Identities = 71/249 (28%), Positives = 116/249 (46%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G+++L+LLV+  +    L   DP  QDL   L AP  G   GTD  GR  ++RL      
Sbjct: 34  GLAVLLLLVIAAIFAPWLATHDPYAQDLANTLQAPGNGHVFGTDELGRDIYSRLLWGARI 93

Query: 79  SLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGS 138
           +LT+          +GL+ G  + +  G +D     + ++ L+ P LIL L F A +  S
Sbjct: 94  TLTIISLVSIIVGPVGLLVGTASGYLGGKFDTVMMRITDIFLSFPSLILSLAFVAALGPS 153

Query: 139 FFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLF 198
                +AIAL  W    R+ R++ ++  +   I A+RL G +   +  + + P     + 
Sbjct: 154 LNNAIIAIALTSWPPIARLARAEAMTFRKADYIAAARLQGASPLRIIVKSIMPMCLPSVL 213

Query: 199 TLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFILV 258
                     IL  A +GFL +G +PP  E G M+    RY   + W++  P + +  + 
Sbjct: 214 IRLTLNMATVILTAAGLGFLGLGAQPPLPEWGAMIATGRRYMLDSWWLVTFPGVAILSVS 273

Query: 259 LSFQMLAKG 267
           L+F +L  G
Sbjct: 274 LAFNLLGDG 282