Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  114 bits (285), Expect = 2e-30
 Identities = 78/244 (31%), Positives = 120/244 (49%), Gaps = 1/244 (0%)

Query: 22  LLILLVMLVLIEHLLYGG-DPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIATSL 80
           +LI L+++  I  L +   DP K      LAAP  G  LGTD +GR   +RL      S+
Sbjct: 13  ILIALLLITAITGLFWTPYDPMKLGFASRLAAPGAGHLLGTDEFGRDVLSRLMVGARASV 72

Query: 81  TMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGSFF 140
            +    VS + + G + G+V+ + RGW D     + N LLA PG++L L   A+   + +
Sbjct: 73  WIGFLTVSFATICGTLIGLVSGYARGWVDGVIMAINNALLAFPGILLALGLLAVFGANQY 132

Query: 141 ILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLFTL 200
            +  A+ +       RVVR   LSL E+  IEAS + G    Y   RH+ P     +  L
Sbjct: 133 GIIFALGIAYTPSMARVVRGAVLSLREREFIEASLVMGNGEIYTMFRHILPNCIAPITVL 192

Query: 201 ACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFILVLS 260
           A    G AIL+ +++ FL +G+ PP    G M+     +  QA+W+   P L + + +L 
Sbjct: 193 ATSMFGWAILSESALSFLGLGVPPPAPTWGNMLAAGRPFIQQAVWLGLFPGLCIALTLLG 252

Query: 261 FQML 264
             +L
Sbjct: 253 INLL 256