Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

 Score =  127 bits (320), Expect = 2e-34
 Identities = 78/250 (31%), Positives = 124/250 (49%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           +G+++++L + L L+   +   DPA Q+L   LA P+     GTD  GR   +R+     
Sbjct: 41  IGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFPNAEHWFGTDELGRDILSRILYGGR 100

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
            +L M +A V   A +GL  G +A +  G  D     + ++ LA P LIL L F A +  
Sbjct: 101 VTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMRVTDVFLAFPRLILALAFVAALKP 160

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
                 LAIAL  W  + R+ R++T+++     + A RL G +AW +  RH+ P     L
Sbjct: 161 GVESAILAIALTAWPPYARLARAETMTVRGSDFVAAYRLTGASAWRIIARHIAPLCVPSL 220

Query: 198 FTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFIL 257
                    + I+  AS+GFL +G +PP  E G M+    R+  +  WV   P + +F++
Sbjct: 221 IVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIATAKRFIFEQWWVATIPGIAIFLV 280

Query: 258 VLSFQMLAKG 267
            L+F  L  G
Sbjct: 281 SLAFNFLGDG 290