Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC from Variovorax sp. SCN45

 Score =  159 bits (402), Expect = 8e-44
 Identities = 88/291 (30%), Positives = 158/291 (54%), Gaps = 5/291 (1%)

Query: 19  VGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAELGLDRSAFELYLQWLWDLL 78
           V  L F+ +  +PGD A R+AAG+   +   A     VRAELGLD+   + ++ +   +L
Sbjct: 19  VAVLVFLFVHMLPGDPA-RLAAGQEADEQTVA----MVRAELGLDKPLPQQFVNFFTHML 73

Query: 79  HLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIPIGVYCGKRTDRWADNLAL 138
             + G S+ +  PV   I      +++L   + + ++   + IG+      ++W D L +
Sbjct: 74  QGDFGTSIRTRRPVSVEIGERFFPTVMLTITSMVWAVIFGMGIGIVSAVYRNKWPDRLGM 133

Query: 139 LTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFLILPALALALGMAAMSSRMIR 198
             ++   + P F +G+ L+ +F++QL WLP  G    K  ILP++ L   +AA+ +R  R
Sbjct: 134 TLAVSGISFPAFALGMLLMQIFSVQLGWLPTVGASSWKHYILPSITLGAAVAAVMARFTR 193

Query: 199 NATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMAFVGIQAVSLVEGIVMIESLF 258
            +  +V+Q  +   AR KG+       +H  RN  +PV+  +G+Q   L+ G +++E++F
Sbjct: 194 ASFVEVIQEDFVRTARAKGVRESSVVFKHTLRNALIPVVTMMGLQFGFLLGGSILVEAVF 253

Query: 259 SWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVDLVQYALDPRLR 309
           +WPG+G  L  A+  RD P+IQ   L+  L F+ +N +VD++   ++P +R
Sbjct: 254 NWPGLGRLLVDAVQMRDYPVIQTLVLLFSLEFILINLVVDVLYGYINPTIR 304