Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (373), Expect = 2e-40
 Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 22/327 (6%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M   LV R YQAL V + +  + F +   + GD    +         V+     A+R EL
Sbjct: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVG-----QSVSEAERQALRDEL 54

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GL+      Y +++   +  +LG S     P +  I   L  +L L   ATL+ +  +IP
Sbjct: 55  GLNDPFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIP 114

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHP----- 175
           +GVY           + +  S +  + PVFL  + L+ +F+++L WLP  G G       
Sbjct: 115 LGVYSAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLG 174

Query: 176 -----------KFLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAF 224
                      + L+LP++ALA  M  +  R++R+   +VL S Y  FA+ KGL   + +
Sbjct: 175 WESGFFTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIY 234

Query: 225 TRHAQRNIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSAL 284
            +HA +N  LPV+   G+Q  ++V   ++ E++F WPG G     AI + D P+I    +
Sbjct: 235 YQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVI 294

Query: 285 VMGLLFVALNTLVDLVQYALDPRLRLS 311
            +GL+FV  NT+VDL+   ++P + L+
Sbjct: 295 FVGLIFVVTNTIVDLLYGLINPTVNLT 321