Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

 Score =  168 bits (426), Expect = 1e-46
 Identities = 90/261 (34%), Positives = 146/261 (55%), Gaps = 1/261 (0%)

Query: 51  DAALA-VRAELGLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGA 109
           DAA+A VR  LGLDR  +  YL WLW+ +HL+ G S ++  PV+  +++ L  +L L G 
Sbjct: 48  DAAIAEVRHTLGLDRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGL 107

Query: 110 ATLLSLFIAIPIGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPV 169
           A   +L ++IP+G+   +   RW D+     + +  + P F +   L+ LF+L L WLP 
Sbjct: 108 ALACTLLLSIPLGLLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPP 167

Query: 170 AGFGHPKFLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQ 229
            G G    L++P LA+AL   ++++R++R +        +  +AR +GL     +  H  
Sbjct: 168 LGRGGAGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHIL 227

Query: 230 RNIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLL 289
           RN  LP++   G+    L+ G ++IE++F+WPGVG     A+  RD P++Q   L++  L
Sbjct: 228 RNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGL 287

Query: 290 FVALNTLVDLVQYALDPRLRL 310
            +  N +VD+    LDPR RL
Sbjct: 288 LMICNLIVDVCYAWLDPRSRL 308