Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  168 bits (426), Expect = 1e-46
 Identities = 104/325 (32%), Positives = 163/325 (50%), Gaps = 15/325 (4%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M  I+V RF Q L + + +  ++F+L++  PGD        R   D +       VR  L
Sbjct: 1   MNNIVVRRFGQLLPMLFFISLVSFLLVKLAPGDPVQAYITPRMSLDDIKR-----VRHSL 55

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+     YL WL ++L  +LG+SL+S  PV+  I+  L  +L L GA+ LL++ IA+P
Sbjct: 56  GLDQPLAMQYLLWLKNVLQGDLGYSLISHRPVLTLIVERLPATLGLMGASLLLAVAIAMP 115

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAG--------- 171
           +G+  G    RW D+L  L + +  + P+F  G+ L+I+F++QLNWLP  G         
Sbjct: 116 LGLLAGAFRHRWLDHLLNLVAYIGISVPIFWFGILLIIIFSVQLNWLPSMGMRTVGAADS 175

Query: 172 -FGHPKFLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQR 230
                +  +LP +AL     +   R IR+ T   L + Y       G        RH  +
Sbjct: 176 WLDVVRHGVLPCVALTFYNLSHYVRYIRSHTITQLSADYVQTQLAYGATRAHILFRHVLK 235

Query: 231 NIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLF 290
           N+ LPV+   G+    LV G  + ES+FSWPG+G     +I   D P+I    ++   + 
Sbjct: 236 NVMLPVITLFGLSFSELVVGAYVTESVFSWPGMGLLGLQSITSLDYPLIMAMVMLSACML 295

Query: 291 VALNTLVDLVQYALDPRLRLSRHVQ 315
           V  N L D++    DPR++   H++
Sbjct: 296 VVGNLLADVLYRVADPRIKAIPHIK 320