Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  172 bits (435), Expect = 1e-47
 Identities = 106/316 (33%), Positives = 159/316 (50%), Gaps = 10/316 (3%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGD---VAYRIAAGRYGYDYVNADAALAV- 56
           M    + R +  L +A  +  + F L+  +P D   VA R+       D V  D A+ + 
Sbjct: 1   MRAYFIKRLFMTLPLAVVMSFVAFSLLNLVPSDPAEVALRVN------DIVPTDEAIQLM 54

Query: 57  RAELGLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLF 116
             ELGLDR  F  Y+ WLW +LH + G S ++ +PV H  M  L  +L LA  + L+ + 
Sbjct: 55  HHELGLDRPFFPRYVLWLWKVLHGDFGTSFITRQPVWHVFMQALPATLYLAAVSLLMIVT 114

Query: 117 IAIPIGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPK 176
           +++ +G+ C    +   D        +  A P + IGL L+   A+ ++  PV G    +
Sbjct: 115 LSLTLGIACALTENTPFDKAVRSVVFLTVAIPNYWIGLLLMWGLAVNMDLFPVGGMQEER 174

Query: 177 FLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPV 236
            +ILP+  L LG      R+IR +    LQ  Y  +AR +GL       +H   N     
Sbjct: 175 SVILPSCTLMLGYIGTYIRLIRGSMIGNLQQNYVLYARARGLPAPLIIGKHVLANSLHAA 234

Query: 237 MAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTL 296
           +  +G+    L+ G V+IE++F+WPGVG     AIF RD PMIQ   L+M LLF+  N L
Sbjct: 235 LVAIGMSIPKLIAGTVVIENIFAWPGVGRLCLSAIFNRDYPMIQAYMLLMALLFLGFNFL 294

Query: 297 VDLVQYALDPRLRLSR 312
            D++Q  LDPR+R  R
Sbjct: 295 TDVLQAKLDPRIRGER 310