Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  168 bits (425), Expect = 2e-46
 Identities = 103/313 (32%), Positives = 165/313 (52%), Gaps = 10/313 (3%)

Query: 3   KILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAELGL 62
           + L+ R  Q L V + +  +TF+L+R IPGD A  +   R        DA   +RA+ GL
Sbjct: 5   RFLLLRPLQMLPVLFGISLITFLLVRAIPGDPARLLLGIRS-----TPDAIARIRAQYGL 59

Query: 63  DRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIPIG 122
           D   +  Y  +L +LL   +G S+V     +  +   +  +LLL   + L++L +A+ + 
Sbjct: 60  DEPVWLQYFYFLRNLLRGEMGRSIVYKIDTLPLVASRVEPTLLLVLGSVLMALLLAVALA 119

Query: 123 VYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFG-----HPKF 177
               +      D L  L S      P F +G+ L++LF+L+L W PV+G+G         
Sbjct: 120 TLAARHHGGLVDQLIRLVSTAGLGFPAFWLGIMLILLFSLRLGWFPVSGYGGNWAERLHH 179

Query: 178 LILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVM 237
           L LP L +AL ++A+ +R +R +    L+S Y A AR +G    + F RH   N  +P++
Sbjct: 180 LFLPCLTVALALSAVLTRNLRVSLLAELKSDYVAAARARGQPERRIFWRHVVPNSLVPML 239

Query: 238 AFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLV 297
             + +    L+ G V+IES+F+ PG+G  L  AIF RD  ++QG  ++  +  V +N L 
Sbjct: 240 NLLAVNIGWLIGGTVVIESVFALPGMGQLLVRAIFSRDYLVVQGVVMLFAVATVTVNLLA 299

Query: 298 DLVQYALDPRLRL 310
           DL+  ALDPR+RL
Sbjct: 300 DLLTVALDPRIRL 312