Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  181 bits (459), Expect = 2e-50
 Identities = 105/309 (33%), Positives = 165/309 (53%), Gaps = 6/309 (1%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M K +  R   AL V ++V  ++F L+  + GD+A  IA    G D   A+    +R + 
Sbjct: 1   MVKYVFQRLLVALAVLFTVAAVSFSLLH-LSGDLATAIA----GPD-ATAETIAQIRVQN 54

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+     + +W+W  L L+ G S      V+  +   +  +L L G + LL+L +AIP
Sbjct: 55  GLDKPLLSQFSRWMWSALQLDFGRSFYFENTVMELVGQRMPVTLKLGGVSLLLALTVAIP 114

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFLIL 180
           +GV      D W D  A+L S++ +A P F   L L+++FA+ L WLPVAG G  +  +L
Sbjct: 115 LGVLAAVFRDTWVDRFAMLVSVVGQAMPNFWFALVLILIFAVGLKWLPVAGNGSWQHFVL 174

Query: 181 PALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMAFV 240
           PA+AL         R+ R+    VL S Y   AR KGL+  +   +H  RN  +PV+A  
Sbjct: 175 PAVALGYYAMPSLMRLTRSGMLDVLGSDYIRTARAKGLSAFKVVVKHGLRNAIIPVVALA 234

Query: 241 GIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVDLV 300
            ++   ++ G V+IES+FS  G+G     +I + D P++Q   L++ + ++ L  L D++
Sbjct: 235 TVELGFMLGGSVVIESVFSLQGLGQLAWDSIARNDFPVVQAIVLIIAVFYIGLTFLADVL 294

Query: 301 QYALDPRLR 309
              LDPRLR
Sbjct: 295 NALLDPRLR 303