Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  161 bits (407), Expect = 2e-44
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 5/306 (1%)

Query: 5   LVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAELGLDR 64
           +V R  + + V   +  L F  ++ +PGD A RI AG         +A  A R  LGL+ 
Sbjct: 5   IVRRLLEMIPVLLVISLLVFGFIKLLPGDPA-RIYAG----PDAPIEAVEAARERLGLND 59

Query: 65  SAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIPIGVY 124
              + YL WL  L+H +LG +  + +PV+  I  +   +L LA A    S+ + + IGV+
Sbjct: 60  PLPQQYLNWLDGLVHGDLGITYRTQQPVLSVIQKSFMPTLWLALAGFAWSVLLGLLIGVF 119

Query: 125 CGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFLILPALA 184
              +  +W D   +  ++   + P F +GL L+   A+      V+G+  P  +ILPAL 
Sbjct: 120 AALKRGKWQDWSLMSLAVGGISMPPFWLGLLLIQFVAMPFGVFSVSGYNKPADIILPALT 179

Query: 185 LALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMAFVGIQA 244
           L   +AA+ +R  R+A  +V Q  Y   AR KGL       +H  RN  +PV+  +G+Q 
Sbjct: 180 LGASVAAVMARFTRSAFLEVTQEDYVRTARAKGLRQRLIVWKHVMRNALIPVITMLGLQF 239

Query: 245 VSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVDLVQYAL 304
             L+ G +++ES+F+WPG+G  L  +I  +D P+IQ   ++    F+ +N LVDL+   +
Sbjct: 240 GFLLGGSIVVESVFNWPGLGWLLIESIKTQDQPVIQALVMLFVFEFILINLLVDLLYAVV 299

Query: 305 DPRLRL 310
           +P +RL
Sbjct: 300 NPAIRL 305