Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  168 bits (425), Expect = 1e-46
 Identities = 91/259 (35%), Positives = 146/259 (56%)

Query: 51  DAALAVRAELGLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAA 110
           D    +RA LG DR  F  Y  +L  L+ L+ G S   S PV   I   L  +LLLA  +
Sbjct: 4   DDLARIRAALGTDRPFFVQYFSFLKGLVTLDFGRSFTGSTPVSRLIADALPATLLLAFIS 63

Query: 111 TLLSLFIAIPIGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVA 170
             +S+ ++IP+G+       + AD +  + S++  + P F +   LV+LF++ L WLP +
Sbjct: 64  MAVSIALSIPLGIKAATSRGKTADQVIRIFSLIGLSFPNFWLATMLVLLFSITLGWLPPS 123

Query: 171 GFGHPKFLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQR 230
           G G     I+P++ + + + A + R++R A    L+S Y   AR KGL+  +   +HA R
Sbjct: 124 GMGGFASYIMPSVTMGVILTATNVRLVRTAMLDTLRSQYVMVARAKGLSESKVLYKHALR 183

Query: 231 NIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLF 290
           N A+P++ + G+Q   L+ GIV+IE +F+WPG+G     A+  RD P++Q    V+ L+ 
Sbjct: 184 NCAIPLITYFGLQFGGLLGGIVVIERVFNWPGLGTLAFDAVGARDYPVLQAVITVLSLMI 243

Query: 291 VALNTLVDLVQYALDPRLR 309
           V +N LVD+    +DPR+R
Sbjct: 244 VGINLLVDIAYGLVDPRIR 262