Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 113/473 (23%), Positives = 197/473 (41%), Gaps = 61/473 (12%)

Query: 81  PLLAKSWT-VSDDGLVWRFQIRPEVQFH--DGSQLTAQAAATAL----------NHALGK 127
           P LAK    +S DGL + F +R +++FH  D  + T    A  +          NH   K
Sbjct: 71  PALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQRQLDPNHPWHK 130

Query: 128 PGVI----------KQVPIKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDAS 177
             ++          K++ +K++   +D  V+   T+ RP A  LA   +A +S  S + +
Sbjct: 131 KSLVGYPYFESMGFKEL-LKSVEKTDDHTVVF--TLTRPEAPFLADLGMAFSSIHSKEYA 187

Query: 178 GNVIRL----------LGTGPYQIAQLQAPHKASVIRFNA----YWGKPASIETINYLAG 223
             +++           +GTGP+   + Q   +A   RF A    + GKPA ++ +     
Sbjct: 188 DQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQA---RFKANPDYFRGKPA-VDPLILAIS 243

Query: 224 HRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHA 283
             +  R    +  +  +     P  IPS+++  NL +   +   T    LN  H  ++ A
Sbjct: 244 TDNNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHKYMSDA 303

Query: 284 DVRQAISLAINREGIAQSVL-KLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLAN 342
            VR AI++A ++ G  +++  K         + P L  ++   K  P R L  A+ LL  
Sbjct: 304 RVRHAINIAFDKAGYTEALFGKGNAVVGTGPYPPTLLGFNEKLKNPP-RDLDKARALLKE 362

Query: 343 QGWTLNDQ-GLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAI 401
            G     +  L  R G             P   L A  +QA L +IG++V+I +     +
Sbjct: 363 AGVPEGTEFTLFTRNGGG--------PTNPNPMLGAQRMQADLAQIGLKVNIKVMEWGEM 414

Query: 402 PAKHHDGTLEMALIARNFGTIADPLPLL---LSDFATHQGSDWGPTNWSSPQFSQLLAEL 458
             +  +G  +M + A   G   DP   L   LS  A   G ++    W + +F  L+ + 
Sbjct: 415 LKRAKNGEHDM-VSAGWVGDNGDPDNFLTPNLSCDAAKNGENY--ARWCNKEFQDLIDKA 471

Query: 459 STESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPFEIN 511
              ++ A+   L  QA  +   + P +P+ Y +   ++ K V GF+  P   N
Sbjct: 472 RAIAEPAQRAALYEQAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLGTN 524